Semantic search

	Common name	Reaction found	Total reaction	Completion rate
COLANSYN-PWY	Colanic acid building blocks biosynthesis	6	11	55.0
CRNFORCAT-PWY	Creatinine degradation I Creatinine catabolism	4	4	100.0
CYANCAT-PWY	Cyanate degradation Cyanate catabolism	3	3	100.0
CYCLOHEXANOL-OXIDATION-PWY	Cyclohexanol degradation	2	5	40.0
CYSTEINE-DEG-PWY	L-cysteine degradation I Cysteine degradation I	2	3	67.0
CYSTSYN-PWY	L-cysteine biosynthesis I	2	2	100.0
DAPLYSINESYN-PWY	L-lysine biosynthesis I L-lysine and L-diaminopimelate biosynthesis	9	9	100.0
DARABCAT-PWY	D-arabinose degradation II D-arabinose catabolism	2	2	100.0
DARABCATK12-PWY	D-arabinose degradation I D-arabinose catabolism	4	4	100.0
DARABITOLUTIL-PWY	D-arabitol degradation D-arabitol utilization	2	2	100.0
DENITRIFICATION-PWY	Nitrate reduction I (denitrification) Denitrification Nitrate respiration	3	5	60.0
DETOX1-PWY	Superoxide radicals degradation Removal of superoxide radicals	2	2	100.0
DETOX1-PWY-1	Reactive oxygen species degradation Removal of superoxide radicals	5	6	83.0
DHGLUCONATE-PYR-CAT-PWY	Glucose degradation (oxidative) 2-dehydro-D-gluconate pyruvate catabolism 2-dehydro-D-gluconate pyruvate degradation 2-dehydro-D-gluconate degradation	2	5	40.0
DISSULFRED-PWY	Sulfate reduction IV (dissimilatory) Sulfate respiration	2	4	50.0
DTDPRHAMSYN-PWY	DTDP-L-rhamnose biosynthesis I	4	4	100.0
ECASYN-PWY	Enterobacterial common antigen biosynthesis ECA biosynthesis	3	7	43.0
ENTBACSYN-PWY	Enterobactin biosynthesis	9	10	90.0
ENTNER-DOUDOROFF-PWY	Entner-Doudoroff pathway I ED pathway	2	2	100.0
ETHYL-PWY	Ethylene biosynthesis I (plants) Ethene biosynthesis from methionine	2	3	67.0
ETOH-ACETYLCOA-ANA-PWY	Ethanol degradation I Acetyl-CoA biosynthesis (from alcohol)	2	2	100.0
FAO-PWY	Fatty acid β-oxidation I	7	7	100.0
FASYN-ELONG-PWY	Fatty acid elongation -- saturated	5	5	100.0
FASYN-INITIAL-PWY	Superpathway of fatty acid biosynthesis initiation (E. coli)	5	8	63.0
FERMENTATION-PWY	Mixed acid fermentation Fermentation	16	16	100.0
FESULFOX-PWY	Sulfur oxidation II (Fe+3-dependent)	1	3	33.0
FORMASS-PWY	Formaldehyde oxidation IV (thiol-independent)	1	1	100.0
FUCCAT-PWY	Fucose degradation Fucose catabolism	4	4	100.0
GALACTCAT-PWY	D-galactonate degradation D-galactonate catabolism	3	3	100.0
GALACTITOLCAT-PWY	Galactitol degradation Galactitol catabolism	4	4	100.0
GALDEG-PWY	D-galactose degradation II De Ley-Doudoroff pathway	2	2	100.0
GALLATE-DEGRADATION-I-PWY	Gallate degradation II	4	5	80.0
GALLATE-DEGRADATION-II-PWY	Gallate degradation I	3	4	75.0
GAMMAHEXCHLORDEG-PWY	Γ-hexachlorocyclohexane degradation	4	11	36.0
GDPRHAMSYN-PWY	GDP-D-rhamnose biosynthesis GDP-α-D-rhamnose biosynthesis	1	2	50.0
GLNSYN-PWY	L-glutamine biosynthesis I	1	1	100.0
GLUAMCAT-PWY	N-acetylglucosamine degradation I Glucosamine degradation N-acetyl-glucosamine degradation	2	2	100.0
GLUCARDEG-PWY	D-glucarate degradation I D-glucarate catabolism	4	4	100.0
GLUCONEO-PWY	Gluconeogenesis I	13	13	100.0
GLUCONSUPER-PWY	D-gluconate degradation Gluconate utilization	1	1	100.0
GLUCOSE1PMETAB-PWY	Glucose and glucose-1-phosphate degradation	5	5	100.0
GLUDEG-I-PWY	GABA shunt	4	6	67.0
GLUDEG-II-PWY	L-glutamate degradation VII (to butanoate) L-glutamate fermentation Mesaconate pathway L-glutamate degradation VII (to butyrate)	3	6	50.0
GLUGLNSYN-PWY	L-glutamate biosynthesis IV L-glutamate biosynthesis from L-glutamine	1	1	100.0
GLUT-REDOX-PWY	Glutathione-glutaredoxin redox reactions	2	2	100.0
GLUTAMATE-DEG1-PWY	L-glutamate degradation I GDH shunt	1	1	100.0
GLUTAMINDEG-PWY	L-glutamine degradation I	1	1	100.0
GLUTAMINEFUM-PWY	L-glutamine degradation II	1	1	100.0
GLUTATHIONESYN-PWY	Glutathione biosynthesis	2	2	100.0
GLUTDEG-PWY	L-glutamate degradation II L-aspartate degradation	2	2	100.0
GLUTORN-PWY	L-ornithine biosynthesis I	5	5	100.0
GLUTSYN-PWY	L-glutamate biosynthesis I	1	1	100.0
GLUTSYNIII-PWY	L-glutamate biosynthesis III	1	1	100.0
GLYCEROLMETAB-PWY	Glycerol degradation V	1	2	50.0
GLYCINE-SYN2-PWY	Glycine biosynthesis II	2	3	67.0
GLYCLEAV-PWY	Glycine cleavage Glycine cleavage system Glycine decarboxylase complex Gcv system Glycine cleavage complex	3	3	100.0
GLYCOCAT-PWY	Glycogen degradation I Glycogen catabolism I	7	8	88.0
GLYCOGENSYNTH-PWY	Glycogen biosynthesis I (from ADP-D-Glucose)	4	4	100.0
GLYCOLATEMET-PWY	Glycolate and glyoxylate degradation I Glycolate utilization I Glycolate degradation I	4	4	100.0
GLYCOLYSIS	Glycolysis I (from glucose 6-phosphate) Embden-Meyerhof pathway Embden-Meyerhof-Parnas pathway EMP pathway Glycolysis (plastidic)	12	12	100.0
GLYCOLYSIS-E-D	Superpathway of glycolysis and Entner-Doudoroff	4	6	67.0
GLYCOLYSIS-TCA-GLYOX-BYPASS	Superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass	3	5	60.0
GLYOXDEG-PWY	Glycolate and glyoxylate degradation II Glyoxylate degradation	2	2	100.0
GLYOXYLATE-BYPASS	Glyoxylate cycle Glyoxylate bypass Glyoxylate shunt	6	6	100.0
GLYSYN-ALA-PWY	Glycine biosynthesis III	1	1	100.0
GLYSYN-PWY	Glycine biosynthesis I	1	1	100.0
GLYSYN-THR-PWY	Glycine biosynthesis IV	1	1	100.0
HCAMHPDEG-PWY	3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-oxopent-4-enoate 3-phenylpropionate and 3-(3-hydroxyphenyl)propionate degradation to 2-oxopent-4-enoate	6	6	100.0
HEME-BIOSYNTHESIS-II	Heme biosynthesis I (aerobic)	4	4	100.0
HEMESYN2-PWY	Heme biosynthesis II (anaerobic)	4	4	100.0
HISDEG-PWY	L-histidine degradation I	4	4	100.0
HISHP-PWY	L-histidine degradation VI	7	8	88.0
HISTSYN-PWY	L-histidine biosynthesis	10	10	100.0
HOMOCYSDEGR-PWY	L-cysteine biosynthesis III (from L-homocysteine) L-homocysteine degradation	4	4	100.0
HOMOSER-THRESYN-PWY	L-threonine biosynthesis	2	2	100.0
HOMOSERSYN-PWY	L-homoserine biosynthesis	3	3	100.0
HSERMETANA-PWY	L-methionine biosynthesis III L-methionine biosynthesis by sulfhydrylation	3	4	75.0
HYDROXYPRODEG-PWY	Trans-4-hydroxy-L-proline degradation I 4-hydroxyproline degradation	1	5	20.0
IDNCAT-PWY	L-idonate degradation L-idonic acid catabolism L-idonate catabolism	3	3	100.0
ILEUDEG-PWY	L-isoleucine degradation I	6	6	100.0
ILEUSYN-PWY	L-isoleucine biosynthesis I (from threonine)	7	7	100.0
KDO-LIPASYN-PWY	(Kdo)2-lipid A biosynthesis I	2	2	100.0
KDO-NAGLIPASYN-PWY	Superpathway of (Kdo)2-lipid A biosynthesis	7	10	70.0
KDOSYN-PWY	Kdo transfer to lipid IVA I	2	2	100.0
KETOGLUCONMET-PWY	Ketogluconate metabolism	6	7	86.0
LACTOSECAT-PWY	Lactose and galactose degradation I Lactose degradation 1 Lactose 6-P degradation I Lactose 6-phosphate degradation Lactose 6'-phosphate degradation	2	4	50.0
LACTOSEUTIL-PWY	Lactose degradation II Lactose degradation 2	3	3	100.0
LARABITOLUTIL-PWY	Xylitol degradation L-arabitol and xylitol utilization L-arabitol and xylitol degradation	1	2	50.0
LEU-DEG2-PWY	L-leucine degradation I	6	6	100.0
LIPA-CORESYN-PWY	Lipid A-core biosynthesis	1	10	10.0
LIPAS-PWY	Triacylglycerol degradation Triacylglyceride degradation Triacylglycerol hydrolysis Lipolysis	4	4	100.0
LIPASYN-PWY	Phospholipases Phospholipase pathway	5	5	100.0
LYSINE-AMINOAD-PWY	L-lysine biosynthesis IV	5	9	56.0
LYSINE-DEG1-PWY	L-lysine degradation XI (mammalian)	5	5	100.0
LYXMET-PWY	L-lyxose degradation L-lyxose metabolism	2	4	50.0
MALATE-ASPARTATE-SHUTTLE-PWY	L-aspartate degradation II Malate/L-aspartate shuttle pathway	2	2	100.0
MALTOSECAT-PWY	Maltose degradation Maltose catabolism	1	2	50.0
MANNCAT-PWY	D-mannose degradation Mannose degradation	1	1	100.0
MANNIDEG-PWY	Mannitol degradation I	1	1	100.0
MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS	Protein N-glycosylation (eukaryotic, high mannose) Mannosyl-chito-dolichol biosynthesis Eukaryotic N-linked glycosylation Dolichyl-diphosphooligosaccharide biosynthesis and attachment	19	19	100.0

Semantic search

Navigation menu

Personal tools

Namespaces

Variants

Views

More

Search

Navigation

Metabolic network components

Reconstruction categories

Reconstruction tools

Reconstruction sources

Tools