Difference between revisions of "CPD-468"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** D-galacturonate degradation I
+
** squalene monooxygenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.14.14.17 EC-1.14.14.17]
 
* Synonym(s):
 
* Synonym(s):
−
** D-galacturonate catabolism
 
−
** D-galacturonate degradation
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''5''' reactions in the full pathway
+
* With identifiers:
−
* [[KDPGALDOL-RXN]]
+
** 1 [[SQUALENE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[EPOXYSQUALENE]][c]
−
== Reaction(s) not found ==
+
* With common name(s):
−
* [http://metacyc.org/META/NEW-IMAGE?object=ALTRO-OXIDOREDUCT-RXN ALTRO-OXIDOREDUCT-RXN]
+
** 1 squalene[c] '''+''' 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''=>''' 1 H2O[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c]
−
* [http://metacyc.org/META/NEW-IMAGE?object=ALTRODEHYDRAT-RXN ALTRODEHYDRAT-RXN]
+
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=DEOXYGLUCONOKIN-RXN DEOXYGLUCONOKIN-RXN]
+
== Genes associated with this reaction  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-06_009670]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
== Pathways  ==
 +
* [[PWY-5670]], epoxysqualene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
* LIGAND-RXN:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02873 R02873]
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02874 R02874]
−
{{#set: common name=D-galacturonate degradation I}}
+
* UNIPROT:
−
{{#set: common name=D-galacturonate catabolism|D-galacturonate degradation}}
+
** [http://www.uniprot.org/uniprot/P52020 P52020]
−
{{#set: reaction found=1}}
+
** [http://www.uniprot.org/uniprot/P32476 P32476]
−
{{#set: reaction not found=5}}
+
** [http://www.uniprot.org/uniprot/Q9T064 Q9T064]
−
{{#set: completion rate=20.0}}
+
** [http://www.uniprot.org/uniprot/O65829 O65829]
 +
** [http://www.uniprot.org/uniprot/O65726 O65726]
 +
** [http://www.uniprot.org/uniprot/O65727 O65727]
 +
** [http://www.uniprot.org/uniprot/O65402 O65402]
 +
** [http://www.uniprot.org/uniprot/O65403 O65403]
 +
** [http://www.uniprot.org/uniprot/O65404 O65404]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=squalene monooxygenase}}
 +
{{#set: ec number=EC-1.14.14.17}}
 +
{{#set: gene associated=Ec-06_009670}}
 +
{{#set: in pathway=PWY-5670|PWY-6098}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 21:44, 17 March 2018

Reaction SQUALENE-MONOOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • squalene monooxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5670, epoxysqualene biosynthesis: PWY-5670
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6098, diploterol and cycloartenol biosynthesis: PWY-6098
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-468&oldid=10126"