Difference between revisions of "CPD-8550"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN3-RXN THIAZOLSYN3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methyl-5(b-hy...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN3-RXN THIAZOLSYN3-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative
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** photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.50 EC-2.7.1.50]
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* Synonym(s):
 
* Synonym(s):
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** photosynthetic 3-hydroxybutyrate biosynthesis (engineered)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''10''' reactions in the full pathway
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** 1 [[THZ]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[THZ-P]][c] '''+''' 1 [[ADP]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 5-(2-hydroxyethyl)-4-methylthiazole[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 4-methyl-5-(2-phosphooxyethyl)thiazole[c] '''+''' 1 ADP[c]
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*** [[Ec-27_004000]]
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*** [[Ec-26_004120]]
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== Genes associated with this reaction  ==
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*** [[Ec-14_005400]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Ec-01_008860]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***AUTOMATED-NAME-MATCH
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* [[3PGAREARR-RXN]]
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== Pathways  ==
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** 7 associated gene(s):
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* [[PWY-6897]], thiamine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6897 PWY-6897]
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*** [[Ec-24_002670]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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*** [[Ec-03_002170]]
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
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*** [[Ec-27_000330]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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*** [[Ec-03_002160]]
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* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
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*** [[Ec-01_000980]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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*** [[Ec-06_009930]]
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== Reconstruction information  ==
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*** [[Ec-10_005410]]
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* [[annotation]]:
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** 2 reconstruction source(s) associated:
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** [[pathwaytools]]:
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*** [[annotation-esiliculosus_genome]]
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*** [[esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[CALVIN-PWY]]
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** 0 associated gene:
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-12_000950]]
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*** [[Ec-06_006860]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PWY-101]]
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** 0 associated gene:
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* [[PWY-7216]]
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** 0 associated gene:
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* [[PYRUVDEH-RXN]]
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** 8 associated gene(s):
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*** [[Ec-01_010530]]
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*** [[Ec-25_000020]]
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*** [[Ec-27_000530]]
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*** [[Ec-18_000080]]
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*** [[Ec-27_004160]]
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*** [[Ec-23_002710]]
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*** [[Ec-25_000140]]
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*** [[Ec-18_003420]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24212 24212]
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{{#set: common name=photosynthetic 3-hydroxybutanoate biosynthesis (engineered)}}
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* LIGAND-RXN:
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{{#set: common name=photosynthetic 3-hydroxybutyrate biosynthesis (engineered)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04448 R04448]
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{{#set: reaction found=7}}
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* UNIPROT:
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{{#set: total reaction=10}}
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** [http://www.uniprot.org/uniprot/P41835 P41835]
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{{#set: completion rate=70.0}}
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** [http://www.uniprot.org/uniprot/O28204 O28204]
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** [http://www.uniprot.org/uniprot/P76423 P76423]
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** [http://www.uniprot.org/uniprot/Q57233 Q57233]
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** [http://www.uniprot.org/uniprot/Q9CG46 Q9CG46]
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** [http://www.uniprot.org/uniprot/P39593 P39593]
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** [http://www.uniprot.org/uniprot/P40386 P40386]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative}}
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{{#set: ec number=EC-2.7.1.50}}
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{{#set: gene associated=Ec-01_008860}}
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{{#set: in pathway=PWY-6897|PWY-7356|PWY-7357}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:45, 17 March 2018

Pathway PWY-7218

  • taxonomic range:
  • common name:
    • photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
  • Synonym(s):
    • photosynthetic 3-hydroxybutyrate biosynthesis (engineered)

Reaction(s) found

7 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-8550&oldid=10214"