Difference between revisions of "PWY-7126"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA-splicing endonuc...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** tRNA-splicing endonuclease subunit Sen15
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** S-adenosyl-L-methionine cycle I
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* ec number:
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** [http://enzyme.expasy.org/EC/4.6.1.16 EC-4.6.1.16]
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* Synonym(s):
 
* Synonym(s):
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** SAM cycle
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** activated methyl cycle
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** AMC
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
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** 1 [[CPD0-2350]][c] '''=>''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] '''+''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''+''' 1 [[tRNA-Introns]][c]
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* [[ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a polycistronic tRNA precursor[c] '''=>''' 1 a 3' half-tRNA molecule with a hydroxyl on its 5' end[c] '''+''' 1 a 5' half-tRNA molecule with a 2',3' cyclic phosphate on its 3' end[c] '''+''' 1 a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus[c]
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*** [[Ec-22_002610]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[HOMOCYSMET-RXN]]
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* [[Ec-21_006500]]
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** 2 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-28_003190]]
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***AUTOMATED-NAME-MATCH
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*** [[Ec-06_000970]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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* [[PWY-6689]], tRNA splicing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689]
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*** [[annotation-esiliculosus_genome]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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* [[SAM-PWY]]
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* [[annotation]]:
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** 0 associated gene:
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** [[pathwaytools]]:
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== Reaction(s) not found ==
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*** [[esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYLHOMOCYSTEINASE-RXN RIBOSYLHOMOCYSTEINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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* ECOCYC:
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** [http://www.uniprot.org/uniprot/O07118 O07118]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6151 PWY-6151]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=tRNA-splicing endonuclease subunit Sen15}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-4.6.1.16}}
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{{#set: common name=S-adenosyl-L-methionine cycle I}}
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{{#set: gene associated=Ec-21_006500}}
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{{#set: common name=SAM cycle|activated methyl cycle|AMC}}
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{{#set: in pathway=PWY-6689}}
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{{#set: reaction found=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=6}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:49, 17 March 2018

Pathway PWY-6151

  • taxonomic range:
  • common name:
    • S-adenosyl-L-methionine cycle I
  • Synonym(s):
    • SAM cycle
    • activated methyl cycle
    • AMC

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7126&oldid=10502"