Difference between revisions of "Ec-06 001640"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16226 RXN-16226] == * direction: ** LEFT-TO-RIGHT * common name: ** Sulfatase-modifying factor...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA-splicing endonuc...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.27.9-RXN 3.1.27.9-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** tRNA-splicing endonuclease subunit Sen15 |
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/4.6.1.16 EC-4.6.1.16] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CPD0-2350]][c] '''=>''' 1 [[Pre-tRNA-5-prime-half-molecules]][c] '''+''' 1 [[tRNA-Introns]][c] '''+''' 1 [[Pre-tRNA-3-prime-half-molecules]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a polycistronic tRNA precursor[c] '''=>''' 1 a 5' half-tRNA molecule with a 2',3' cyclic phosphate on its 3' end[c] '''+''' 1 a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus[c] '''+''' 1 a 3' half-tRNA molecule with a hydroxyl on its 5' end[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[Ec- | + | * [[Ec-21_006500]] |
** ESILICULOSUS_GENOME | ** ESILICULOSUS_GENOME | ||
***AUTOMATED-NAME-MATCH | ***AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-6689]], tRNA splicing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[annotation]] | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/O07118 O07118] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=tRNA-splicing endonuclease subunit Sen15}} |
| − | {{#set: ec number=EC- | + | {{#set: ec number=EC-4.6.1.16}} |
| − | {{#set: gene associated=Ec- | + | {{#set: gene associated=Ec-21_006500}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=PWY-6689}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
| − | |||
Revision as of 21:49, 17 March 2018
Contents
Reaction 3.1.27.9-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- tRNA-splicing endonuclease subunit Sen15
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD0-2350[c] => 1 Pre-tRNA-5-prime-half-molecules[c] + 1 tRNA-Introns[c] + 1 Pre-tRNA-3-prime-half-molecules[c]
- With common name(s):
- 1 a polycistronic tRNA precursor[c] => 1 a 5' half-tRNA molecule with a 2',3' cyclic phosphate on its 3' end[c] + 1 a tRNA intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus[c] + 1 a 3' half-tRNA molecule with a hydroxyl on its 5' end[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Ec-21_006500
- ESILICULOSUS_GENOME
- AUTOMATED-NAME-MATCH
- ESILICULOSUS_GENOME
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- UNIPROT:
