Difference between revisions of "CPD-11524"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3341 RXN-3341] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3341 RXN-3341] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic
 
−
** Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.4 EC-6.1.1.4]
+
** [http://enzyme.expasy.org/EC/1.1.1.343 EC-1.1.1.343]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[LEU]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[CPD-2961]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a tRNAleu[c] '''+''' 1 L-leucine[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-leucyl-[tRNAleu][c] '''+''' 1 AMP[c]
+
** 1 D-gluconate 6-phosphate[c] '''+''' 1 NAD+[c] '''=>''' 1 CO2[c] '''+''' 1 D-ribulose 5-phosphate[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-06_008730]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-12_001400]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11688 11688]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33023 33023]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/O27552 O27552]
+
−
** [http://www.uniprot.org/uniprot/P56457 P56457]
+
−
** [http://www.uniprot.org/uniprot/O51267 O51267]
+
−
** [http://www.uniprot.org/uniprot/O83595 O83595]
+
−
** [http://www.uniprot.org/uniprot/O84211 O84211]
+
−
** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
+
−
** [http://www.uniprot.org/uniprot/P47508 P47508]
+
−
** [http://www.uniprot.org/uniprot/P36430 P36430]
+
−
** [http://www.uniprot.org/uniprot/O66680 O66680]
+
−
** [http://www.uniprot.org/uniprot/O67646 O67646]
+
−
** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
+
−
** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
+
−
** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
+
−
** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
+
−
** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
+
−
** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
+
−
** [http://www.uniprot.org/uniprot/P43827 P43827]
+
−
** [http://www.uniprot.org/uniprot/O58698 O58698]
+
−
** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
+
−
** [http://www.uniprot.org/uniprot/P26637 P26637]
+
−
** [http://www.uniprot.org/uniprot/P75398 P75398]
+
−
** [http://www.uniprot.org/uniprot/P73274 P73274]
+
−
** [http://www.uniprot.org/uniprot/Q48955 Q48955]
+
−
** [http://www.uniprot.org/uniprot/Q48964 Q48964]
+
−
** [http://www.uniprot.org/uniprot/Q49051 Q49051]
+
−
** [http://www.uniprot.org/uniprot/P11325 P11325]
+
−
** [http://www.uniprot.org/uniprot/P07813 P07813]
+
−
** [http://www.uniprot.org/uniprot/P10857 P10857]
+
−
** [http://www.uniprot.org/uniprot/P15181 P15181]
+
−
** [http://www.uniprot.org/uniprot/Q50192 Q50192]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic}}
+
{{#set: ec number=EC-1.1.1.343}}
−
{{#set: common name=Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding}}
+
{{#set: in pathway=RUMP-PWY}}
−
{{#set: ec number=EC-6.1.1.4}}
+
−
{{#set: gene associated=Ec-06_008730|Ec-12_001400}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:53, 17 March 2018

Reaction RXN-3341

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-gluconate 6-phosphate[c] + 1 NAD+[c] => 1 CO2[c] + 1 D-ribulose 5-phosphate[c] + 1 NADH[c]

Genes associated with this reaction

Pathways

  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-11524&oldid=10755"