Difference between revisions of "CPD-690"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-prote...")
 
(Created page with "Category:Gene == Gene Ec-03_002920 == * left end position: ** 3414274 * transcription direction: ** NEGATIVE * right end position: ** 3423257 * centisome position: ** 52.2...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] ==
+
== Gene Ec-03_002920 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3414274
−
* common name:
+
* transcription direction:
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
** NEGATIVE
−
** Beta-ketoacyl synthase, N-terminal
+
* right end position:
−
** Thiolase-like, subgroup
+
** 3423257
−
** beta-ketoacyl synthase, partial
+
* centisome position:
−
* ec number:
+
** 52.2967   
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
−
** β-ketoacyl-ACP synthase I
+
** Esi_0238_0020
−
** β-ketoacyl-acyl carrier protein synthetase
+
** Esi0238_0020
−
** β-ketoacyl-[acyl carrier protein] synthase
+
** SPL
−
** condensing enzyme
+
−
** β-ketoacyl acyl carrier protein synthase
+
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
−
** acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
+
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[RXN-13729]]
−
** 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** esiliculosus_genome
−
* With common name(s):
+
***ec-number
−
** 1 a dodecanoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a 3-oxo-myristoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
+
* [[RXN3DJ-11230]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-27_003480]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-12_000640]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-27_002090]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-12_000650]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
 +
* [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]]
 +
** esiliculosus_genome
 +
***ec-number
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
−
== Pathways ==
+
== Pathways associated ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[PWY-7119]]
−
** '''28''' reactions found over '''31''' reactions in the full pathway
+
* [[PWY3DJ-11470]]
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3414274}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
{{#set: right end position=3423257}}
−
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: centisome position=52.2967    }}
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
{{#set: common name=Esi_0238_0020|Esi0238_0020|SPL}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: reaction associated=RXN-13729|RXN3DJ-11230|SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: pathway associated=PWY-7119|PWY3DJ-11470}}
−
{{#set: ec number=EC-2.3.1.41}}
+
−
{{#set: common name=β-ketoacyl-ACP synthase I|β-ketoacyl-acyl carrier protein synthetase|β-ketoacyl-[acyl carrier protein] synthase|condensing enzyme|β-ketoacyl acyl carrier protein synthase|3-oxoacyl-[acyl-carrier-protein] synthase|acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)}}
+
−
{{#set: gene associated=Ec-27_003480|Ec-12_000640|Ec-27_002090|Ec-12_000650}}
+
−
{{#set: in pathway=PWY-5971}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 20:54, 17 March 2018

Gene Ec-03_002920

  • left end position:
    • 3414274
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3423257
  • centisome position:
    • 52.2967
  • Synonym(s):
    • Esi_0238_0020
    • Esi0238_0020
    • SPL

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-690&oldid=10808"