Difference between revisions of "Ec-06 001650"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-15_000240 == * left end position: ** 429838 * transcription direction: ** POSITIVE * right end position: ** 437706 * centisome position: ** 7.9625...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEH-RXN PYRUVDEH-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-15_000240 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEH-RXN PYRUVDEH-RXN] ==
−
* left end position:
+
* direction:
−
** 429838
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** POSITIVE
+
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
−
* right end position:
+
−
** 437706
+
−
* centisome position:
+
−
** 7.962539   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0012_0136
 
−
** Esi0012_0136
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN-12086]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[ACETYL-COA]][c]
−
***go-term
+
* With common name(s):
−
* [[RXN-12579]]
+
** 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 pyruvate[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 acetyl-CoA[c]
−
** esiliculosus_genome
+
 
−
***go-term
+
== Genes associated with this reaction  ==
−
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** esiliculosus_genome
+
* [[Ec-01_010530]]
−
***go-term
+
** [[pantograph]]-[[aragem]]
−
== Pathways associated ==
+
** [[pantograph]]-[[aragem]]
−
* [[LIPAS-PWY]]
+
* [[Ec-25_000020]]
−
* [[PWY-6857]]
+
** [[pantograph]]-[[aragem]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-27_000530]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-18_000080]]
 +
** [[pantograph]]-[[aragem]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-27_004160]]
 +
** [[pantograph]]-[[aragem]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-23_002710]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-25_000140]]
 +
** [[pantograph]]-[[aragem]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-18_003420]]
 +
** [[pantograph]]-[[aragem]]
 +
== Pathways ==
 +
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
 +
** '''8''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5537]], pyruvate fermentation to acetate V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]], superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-TCA-GLYOX-BYPASS GLYCOLYSIS-TCA-GLYOX-BYPASS]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5482]], pyruvate fermentation to acetate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5482 PWY-5482]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=429838}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28042 28042]
−
{{#set: right end position=437706}}
+
* LIGAND-RXN:
−
{{#set: centisome position=7.962539    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00209 R00209]
−
{{#set: common name=Esi_0012_0136|Esi0012_0136}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
+
{{#set: ec number=EC-1.2.1}}
−
{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
+
{{#set: gene associated=Ec-01_010530|Ec-25_000020|Ec-27_000530|Ec-18_000080|Ec-27_004160|Ec-23_002710|Ec-25_000140|Ec-18_003420}}
 +
{{#set: in pathway=PWY-7218|PWY-7384|PWY-6886|PWY-5537|GLYCOLYSIS-TCA-GLYOX-BYPASS|PWY-5482}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 21:55, 17 March 2018

Reaction PYRUVDEH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 NAD+[c] + 1 pyruvate[c] => 1 CO2[c] + 1 NADH[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7218, photosynthetic 3-hydroxybutanoate biosynthesis (engineered): PWY-7218
    • 7 reactions found over 10 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial): PWY-7384
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-6886, 1-butanol autotrophic biosynthesis (engineered): PWY-6886
    • 8 reactions found over 11 reactions in the full pathway
  • PWY-5537, pyruvate fermentation to acetate V: PWY-5537
    • 2 reactions found over 4 reactions in the full pathway
  • GLYCOLYSIS-TCA-GLYOX-BYPASS, superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass: GLYCOLYSIS-TCA-GLYOX-BYPASS
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5482, pyruvate fermentation to acetate II: PWY-5482
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_001650&oldid=10905"