Difference between revisions of "RXN-16081"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** S-adenosyl-L-methionine:L-homocysteine S-methyltransferase
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** trans, trans-farnesyl diphosphate biosynthesis
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** S-adenosylmethionine-homocysteine S-methyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1 EC-2.1.1]
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* Synonym(s):
 
* Synonym(s):
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** FPP biosynthesis
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** trans, trans-farnesyl diphosphate biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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* [[FPPSYN-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 L-homocysteine[c] '''=>''' 1 L-methionine[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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*** [[Ec-07_006170]]
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*** [[Ec-10_003020]]
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== Genes associated with this reaction  ==
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*** [[Ec-16_004330]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[Ec-06_000980]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***GO-TERM
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* [[GPPSYN-RXN]]
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* [[Ec-11_005000]]
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** 12 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-07_006170]]
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***GO-TERM
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*** [[Ec-16_004330]]
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** [[pantograph]]-[[aragem]]
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*** [[Ec-08_002270]]
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== Pathways  ==
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*** [[Ec-10_003020]]
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* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
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*** [[Ec-00_007350]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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*** [[Ec-14_006550]]
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== Reconstruction information  ==
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*** [[Ec-24_003910]]
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* [[orthology]]:
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*** [[Ec-26_003280]]
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** [[pantograph]]:
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*** [[Ec-21_000990]]
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*** [[aragem]]
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*** [[Ec-25_002110]]
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* [[annotation]]:
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*** [[Ec-17_001240]]
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** [[pathwaytools]]:
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*** [[Ec-18_000990]]
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*** [[esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[IPPISOM-RXN]]
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** 2 associated gene(s):
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*** [[Ec-11_001030]]
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*** [[Ec-18_002690]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21820 21820]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5123 PWY-5123]
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R00650 R00650]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5123 PWY-5123]
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* UNIPROT:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/Q9M1W4 Q9M1W4]
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.uniprot.org/uniprot/Q9SDL7 Q9SDL7]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=trans, trans-farnesyl diphosphate biosynthesis}}
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{{#set: common name=S-adenosyl-L-methionine:L-homocysteine S-methyltransferase}}
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{{#set: common name=FPP biosynthesis|trans, trans-farnesyl diphosphate biosynthesis}}
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{{#set: common name=S-adenosylmethionine-homocysteine S-methyltransferase}}
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{{#set: reaction found=3}}
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{{#set: ec number=EC-2.1.1}}
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{{#set: total reaction=3}}
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{{#set: gene associated=Ec-06_000980|Ec-11_005000}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=PWY-702}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:57, 17 March 2018

Pathway PWY-5123

  • taxonomic range:
  • common name:
    • trans, trans-farnesyl diphosphate biosynthesis
  • Synonym(s):
    • FPP biosynthesis
    • trans, trans-farnesyl diphosphate biosynthesis

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links





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