Difference between revisions of "RXN-11329"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] == * direction: ** REVERSIBLE * common name: ** P-loop c...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] == * direction: ** REVERSIBLE * common name: ** Carbohydrate kin...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-KINASE-RXN SHIKIMATE-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-KIN-RXN GLYCEROL-KIN-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** P-loop containing nucleoside triphosphate hydrolase
+
** Carbohydrate kinase, FGGY, C-terminal
−
** shikimate kinase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.71 EC-2.7.1.71]
+
** [http://enzyme.expasy.org/EC/2.7.1.30 EC-2.7.1.30]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[SHIKIMATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[SHIKIMATE-5P]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[GLYCEROL]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 shikimate[c] '''<=>''' 1 ADP[c] '''+''' 1 shikimate 3-phosphate[c] '''+''' 1 H+[c]
+
** 1 ATP[c] '''+''' 1 glycerol[c] '''<=>''' 1 ADP[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-02_005600]]
+
* [[Ec-21_004370]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
***EC-NUMBER
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
−
* [[Ec-11_000770]]
 
−
** ESILICULOSUS_GENOME
 
−
***GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
+
* [[PWY-4261]], glycerol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4261 PWY-4261]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13121 13121]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21644 21644]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02412 R02412]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00847 R00847]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0A6D7 P0A6D7]
+
** [http://www.uniprot.org/uniprot/P18157 P18157]
−
** [http://www.uniprot.org/uniprot/Q9PIB5 Q9PIB5]
+
** [http://www.uniprot.org/uniprot/P47284 P47284]
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
+
** [http://www.uniprot.org/uniprot/Q9CG64 Q9CG64]
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
+
** [http://www.uniprot.org/uniprot/Q9V207 Q9V207]
−
** [http://www.uniprot.org/uniprot/P43880 P43880]
+
** [http://www.uniprot.org/uniprot/P44400 P44400]
−
** [http://www.uniprot.org/uniprot/P63600 P63600]
+
** [http://www.uniprot.org/uniprot/Q9WX53 Q9WX53]
−
** [http://www.uniprot.org/uniprot/Q9CEU1 Q9CEU1]
+
** [http://www.uniprot.org/uniprot/Q7M0X5 Q7M0X5]
−
** [http://www.uniprot.org/uniprot/P37944 P37944]
+
** [http://www.uniprot.org/uniprot/P0A6F3 P0A6F3]
−
** [http://www.uniprot.org/uniprot/P0A6E1 P0A6E1]
+
** [http://www.uniprot.org/uniprot/P25013 P25013]
−
** [http://www.uniprot.org/uniprot/P10880 P10880]
+
** [http://www.uniprot.org/uniprot/P19255 P19255]
−
** [http://www.uniprot.org/uniprot/Q00497 Q00497]
+
** [http://www.uniprot.org/uniprot/P32190 P32190]
−
** [http://www.uniprot.org/uniprot/P34003 P34003]
+
** [http://www.uniprot.org/uniprot/P32189 P32189]
−
** [http://www.uniprot.org/uniprot/P43906 P43906]
+
** [http://www.uniprot.org/uniprot/P95907 P95907]
−
** [http://www.uniprot.org/uniprot/P72796 P72796]
+
** [http://www.uniprot.org/uniprot/Q49011 Q49011]
 +
** [http://www.uniprot.org/uniprot/O93623 O93623]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
+
{{#set: common name=Carbohydrate kinase, FGGY, C-terminal}}
−
{{#set: common name=shikimate kinase}}
+
{{#set: ec number=EC-2.7.1.30}}
−
{{#set: ec number=EC-2.7.1.71}}
+
{{#set: gene associated=Ec-21_004370}}
−
{{#set: gene associated=Ec-02_005600|Ec-11_000770}}
+
{{#set: in pathway=PWY-4261}}
−
{{#set: in pathway=PWY-6163}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 20:59, 17 March 2018

Reaction GLYCEROL-KIN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Carbohydrate kinase, FGGY, C-terminal
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 glycerol[c] <=> 1 ADP[c] + 1 sn-glycerol 3-phosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4261, glycerol degradation I: PWY-4261
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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