Difference between revisions of "ALLYSINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCDEHYDRAT-RXN DTDPGLUCDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dTDP-...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6749 PWY-6749] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCDEHYDRAT-RXN DTDPGLUCDEHYDRAT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6749 PWY-6749] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** dTDP-glucose 4,6-dehydratase
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** CMP-legionaminate biosynthesis I
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.46 EC-4.2.1.46]
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* Synonym(s):
 
* Synonym(s):
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** CMP-legionaminic acid biosynthesis I
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** 5,7-diacetamido-3,5,7,9-tetradeoxy-D-glycero-D-galacto-nonulosonic acid biosynthesis I
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** CMP-N, N-diacetyllegionaminate biosynthesis I
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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  '''1''' reactions found over '''10''' reactions in the full pathway
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** 1 [[DTDP-D-GLUCOSE]][c] '''=>''' 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''+''' 1 [[WATER]][c]
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* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 dTDP-α-D-glucose[c] '''=>''' 1 dTDP-4-dehydro-6-deoxy-α-D-glucopyranose[c] '''+''' 1 H2O[c]
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*** [[Ec-22_000810]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Ec-01_007350]]
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* [http://metacyc.org/META/NEW-IMAGE?object=5.4.2.10-RXN 5.4.2.10-RXN]
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** [[pantograph]]-[[aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12231 RXN-12231]
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* [[Ec-27_005770]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12232 RXN-12232]
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** ESILICULOSUS_GENOME
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12233 RXN-12233]
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***GO-TERM
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12234 RXN-12234]
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== Pathways ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12235 RXN-12235]
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* [[PWY-7315]], dTDP-N-acetylthomosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12236 RXN-12236]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12238 RXN-12238]
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* [[PWY-7316]], dTDP-N-acetylviosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7316 PWY-7316]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12239 RXN-12239]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6953]], dTDP-3-acetamido-α-D-fucos biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7301]], dTDP-4-O-demethyl-β-L-noviose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7301 PWY-7301]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7657]], dTDP-β-L-digitoxose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7657 PWY-7657]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7318]], dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7318 PWY-7318]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7312]], dTDP-D-β-fucofuranose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7312 PWY-7312]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6942]], dTDP-D-desosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6942 PWY-6942]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7104]], dTDP-L-megosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7104 PWY-7104]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7440]], dTDP-β-L-4-epi-vancosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7440 PWY-7440]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6808]], dTDP-D-forosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6808 PWY-6808]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7413]], dTDP-6-deoxy-α-D-allose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7413 PWY-7413]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6976]], dTDP-L-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6976 PWY-6976]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7688]], dTDP-D-ravidosamine and dTDP-4-acetyl-D-ravidosamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7688 PWY-7688]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6974]], dTDP-L-olivose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6974 PWY-6974]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6973]], dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6973 PWY-6973]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-3221]], dTDP-L-rhamnose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3221 PWY-3221]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7414]], dTDP-α-D-mycaminose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7414 PWY-7414]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17221 17221]
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{{#set: common name=CMP-legionaminate biosynthesis I}}
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* LIGAND-RXN:
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{{#set: common name=CMP-legionaminic acid biosynthesis I|5,7-diacetamido-3,5,7,9-tetradeoxy-D-glycero-D-galacto-nonulosonic acid biosynthesis I|CMP-N, N-diacetyllegionaminate biosynthesis I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06513 R06513]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=10}}
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** [http://www.uniprot.org/uniprot/Q9R5L1 Q9R5L1]
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{{#set: completion rate=10.0}}
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** [http://www.uniprot.org/uniprot/P44914 P44914]
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** [http://www.uniprot.org/uniprot/P29782 P29782]
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** [http://www.uniprot.org/uniprot/P27830 P27830]
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** [http://www.uniprot.org/uniprot/P55294 P55294]
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** [http://www.uniprot.org/uniprot/Q9S642 Q9S642]
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** [http://www.uniprot.org/uniprot/P37759 P37759]
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** [http://www.uniprot.org/uniprot/P26391 P26391]
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** [http://www.uniprot.org/uniprot/Q59626 Q59626]
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** [http://www.uniprot.org/uniprot/P39630 P39630]
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** [http://www.uniprot.org/uniprot/P37777 P37777]
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** [http://www.uniprot.org/uniprot/P37761 P37761]
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** [http://www.uniprot.org/uniprot/Q54144 Q54144]
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** [http://www.uniprot.org/uniprot/Q56173 Q56173]
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** [http://www.uniprot.org/uniprot/Q55420 Q55420]
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** [http://www.uniprot.org/uniprot/P55293 P55293]
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** [http://www.uniprot.org/uniprot/O66249 O66249]
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** [http://www.uniprot.org/uniprot/Q9RMC4 Q9RMC4]
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** [http://www.uniprot.org/uniprot/O08246 O08246]
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** [http://www.uniprot.org/uniprot/Q9RR28 Q9RR28]
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** [http://www.uniprot.org/uniprot/Q9SMJ5 Q9SMJ5]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=dTDP-glucose 4,6-dehydratase}}
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{{#set: ec number=EC-4.2.1.46}}
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{{#set: gene associated=Ec-01_007350|Ec-27_005770}}
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{{#set: in pathway=PWY-7315|PWY-7316|PWY-6953|PWY-7301|PWY-7657|PWY-7318|PWY-7312|PWY-6942|PWY-7104|PWY-7440|DTDPRHAMSYN-PWY|PWY-6808|PWY-7413|PWY-6976|PWY-7688|PWY-6974|PWY-6973|PWY-3221|PWY-7414}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:59, 17 March 2018

Pathway PWY-6749

  • taxonomic range:
  • common name:
    • CMP-legionaminate biosynthesis I
  • Synonym(s):
    • CMP-legionaminic acid biosynthesis I
    • 5,7-diacetamido-3,5,7,9-tetradeoxy-D-glycero-D-galacto-nonulosonic acid biosynthesis I
    • CMP-N, N-diacetyllegionaminate biosynthesis I

Reaction(s) found

1 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ALLYSINE&oldid=11180"