Difference between revisions of "3.2.1.6-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENDECARBOX-RXN UROGENDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Uroporphy...")
 
(Created page with "Category:Gene == Gene Ec-01_010610 == * left end position: ** 8942908 * transcription direction: ** POSITIVE * right end position: ** 8946444 * centisome position: ** 86.6...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENDECARBOX-RXN UROGENDECARBOX-RXN] ==
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== Gene Ec-01_010610 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 8942908
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* common name:
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* transcription direction:
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** Uroporphyrinogen decarboxylase, chloroplast precursor
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37]
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** 8946444
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* centisome position:
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** 86.66588   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0163_0062
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** Esi0163_0062
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** CLP
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3.4.21.92-RXN]]
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** 4 [[PROTON]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c] '''=>''' 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 4 [[CARBON-DIOXIDE]][c]
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** esiliculosus_genome
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* With common name(s):
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***ec-number
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** 4 H+[c] '''+''' 1 uroporphyrinogen-III[c] '''=>''' 1 coproporphyrinogen III[c] '''+''' 4 CO2[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_000360]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-24_000650]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-24_000620]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7766]], heme biosynthesis IV (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7766 PWY-7766]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=8942908}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19865 19865]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=8946444}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03197 R03197]
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{{#set: centisome position=86.66588    }}
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* UNIPROT:
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{{#set: common name=Esi_0163_0062|Esi0163_0062|CLP}}
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** [http://www.uniprot.org/uniprot/P06132 P06132]
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{{#set: reaction associated=3.4.21.92-RXN}}
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** [http://www.uniprot.org/uniprot/P16891 P16891]
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** [http://www.uniprot.org/uniprot/P32395 P32395]
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** [http://www.uniprot.org/uniprot/Q9PN54 Q9PN54]
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** [http://www.uniprot.org/uniprot/Q9JV52 Q9JV52]
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** [http://www.uniprot.org/uniprot/P29680 P29680]
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** [http://www.uniprot.org/uniprot/P32347 P32347]
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** [http://www.uniprot.org/uniprot/P32920 P32920]
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** [http://www.uniprot.org/uniprot/P54224 P54224]
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** [http://www.uniprot.org/uniprot/O81220 O81220]
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** [http://www.uniprot.org/uniprot/P70697 P70697]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Uroporphyrinogen decarboxylase, chloroplast precursor}}
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{{#set: ec number=EC-4.1.1.37}}
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{{#set: gene associated=Ec-01_000360|Ec-24_000650|Ec-24_000620}}
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{{#set: in pathway=HEMESYN2-PWY|PWY0-1415|PWY-7159|PWY-7766|CHLOROPHYLL-SYN|HEME-BIOSYNTHESIS-II|PWY-5531}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:05, 17 March 2018

Gene Ec-01_010610

  • left end position:
    • 8942908
  • transcription direction:
    • POSITIVE
  • right end position:
    • 8946444
  • centisome position:
    • 86.66588
  • Synonym(s):
    • Esi_0163_0062
    • Esi0163_0062
    • CLP

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=3.2.1.6-RXN&oldid=11583"