Difference between revisions of "Ec-21 002310"

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(Created page with "Category:Gene == Gene Ec-25_001360 == * left end position: ** 1595485 * transcription direction: ** POSITIVE * right end position: ** 1608476 * centisome position: ** 35.8...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN--TRNA-LIGASE-RXN TRYPTOPHAN--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-25_001360 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN--TRNA-LIGASE-RXN TRYPTOPHAN--TRNA-LIGASE-RXN] ==
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* left end position:
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* direction:
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** 1595485
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Tryptophan--tRNA ligase
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* right end position:
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* ec number:
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** 1608476
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** [http://enzyme.expasy.org/EC/6.1.1.2 EC-6.1.1.2]
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* centisome position:
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** 35.84604   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0173_0060
 
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** Esi0173_0060
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[FUMHYDR-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRP-tRNAs]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[PPI]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 a tRNAtrp[c] '''+''' 1 L-tryptophan[c] '''=>''' 1 AMP[c] '''+''' 1 an L-tryptophanyl-[tRNAtrp][c] '''+''' 1 diphosphate[c]
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* [[FERMENTATION-PWY]]
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* [[PWY-561]]
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== Genes associated with this reaction  ==
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* [[PWY-5913]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[P42-PWY]]
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* [[Ec-08_005870]]
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* [[PWY-7384]]
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** ESILICULOSUS_GENOME
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* [[PWY-5392]]
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***EC-NUMBER
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* [[P23-PWY]]
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== Pathways  ==
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* [[P105-PWY]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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* [[PWY-6969]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[PWY-6728]]
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== Reconstruction information  ==
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* [[REDCITCYC]]
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* Category: [[annotation]]
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* [[PWY-7254]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[P108-PWY]]
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*** Tool: [[pathwaytools]]
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* [[TCA]]
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* [[PWY66-398]]
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* [[PWY-5690]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=1595485}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24080 24080]
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{{#set: right end position=1608476}}
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* LIGAND-RXN:
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{{#set: centisome position=35.84604    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
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{{#set: common name=Esi_0173_0060|Esi0173_0060}}
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* UNIPROT:
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{{#set: reaction associated=FUMHYDR-RXN}}
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** [http://www.uniprot.org/uniprot/P23381 P23381]
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{{#set: pathway associated=FERMENTATION-PWY|PWY-561|PWY-5913|P42-PWY|PWY-7384|PWY-5392|P23-PWY|P105-PWY|PWY-6969|PWY-6728|REDCITCYC|PWY-7254|P108-PWY|TCA|PWY66-398|PWY-5690}}
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** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
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** [http://www.uniprot.org/uniprot/O84589 O84589]
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** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
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** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
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** [http://www.uniprot.org/uniprot/P43835 P43835]
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** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
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** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
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** [http://www.uniprot.org/uniprot/O26352 O26352]
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** [http://www.uniprot.org/uniprot/O51038 O51038]
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** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
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** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
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** [http://www.uniprot.org/uniprot/Q58810 Q58810]
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** [http://www.uniprot.org/uniprot/O83640 O83640]
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** [http://www.uniprot.org/uniprot/P67590 P67590]
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** [http://www.uniprot.org/uniprot/O67115 O67115]
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** [http://www.uniprot.org/uniprot/P47372 P47372]
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** [http://www.uniprot.org/uniprot/P32921 P32921]
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** [http://www.uniprot.org/uniprot/Q12109 Q12109]
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** [http://www.uniprot.org/uniprot/Q49901 Q49901]
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** [http://www.uniprot.org/uniprot/P75510 P75510]
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** [http://www.uniprot.org/uniprot/O42875 O42875]
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** [http://www.uniprot.org/uniprot/O96771 O96771]
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** [http://www.uniprot.org/uniprot/P17248 P17248]
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** [http://www.uniprot.org/uniprot/P21656 P21656]
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** [http://www.uniprot.org/uniprot/P04803 P04803]
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** [http://www.uniprot.org/uniprot/P00954 P00954]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Tryptophan--tRNA ligase}}
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{{#set: ec number=EC-6.1.1.2}}
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{{#set: gene associated=Ec-08_005870}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 21:16, 17 March 2018

Reaction TRYPTOPHAN--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tryptophan--tRNA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 H+[c] + 1 a tRNAtrp[c] + 1 L-tryptophan[c] => 1 AMP[c] + 1 an L-tryptophanyl-[tRNAtrp][c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_002310&oldid=12327"