Difference between revisions of "PWY-6443"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] == * direction: ** LEFT-TO-RIGHT * common name: ** Amidase * ec number: ** [http...")
 
(Created page with "Category:Gene == Gene Ec-01_009140 == * left end position: ** 7693622 * transcription direction: ** NEGATIVE * right end position: ** 7698194 * centisome position: ** 74.5...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNN-404 RXNN-404] ==
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== Gene Ec-01_009140 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 7693622
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* common name:
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* transcription direction:
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** Amidase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
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** 7698194
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* centisome position:
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** 74.55903   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0203_0046
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** Esi0203_0046
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[5-FORMYL-THF-CYCLO-LIGASE-RXN]]
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** 1 [[CPD-237]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 1 [[AMMONIUM]][c]
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** esiliculosus_genome
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* With common name(s):
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***go-term
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** 1 indole-3-acetamide[c] '''+''' 1 H2O[c] '''=>''' 1 indole-3-acetate[c] '''+''' 1 ammonium[c]
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== Pathways associated ==
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* [[PWY-2201]]
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== Genes associated with this reaction  ==
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* [[1CMET2-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-3841]]
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* [[Ec-06_009020]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-02_005910]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
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** '''2''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-5025]], indole-3-acetate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5025 PWY-5025]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-3161]], indole-3-acetate biosynthesis III (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3161 PWY-3161]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=7693622}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34371 34371]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7698194}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03096 R03096]
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{{#set: centisome position=74.55903    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0203_0046|Esi0203_0046}}
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{{#set: common name=Amidase}}
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{{#set: reaction associated=5-FORMYL-THF-CYCLO-LIGASE-RXN}}
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{{#set: ec number=EC-3.5.1.4}}
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{{#set: pathway associated=PWY-2201|1CMET2-PWY|PWY-3841}}
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{{#set: gene associated=Ec-06_009020|Ec-02_005910}}
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{{#set: in pathway=PWY-581|PWY-5025|PWY-3161}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:17, 17 March 2018

Gene Ec-01_009140

  • left end position:
    • 7693622
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7698194
  • centisome position:
    • 74.55903
  • Synonym(s):
    • Esi_0203_0046
    • Esi0203_0046

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6443&oldid=12426"