Difference between revisions of "COBALSYN-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-pro...")
 
(Created page with "Category:Gene == Gene Ec-22_000080 == * left end position: ** 101833 * transcription direction: ** NEGATIVE * right end position: ** 111058 * centisome position: ** 2.2550...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10658 RXN-10658] ==
+
== Gene Ec-22_000080 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 101833
−
* common name:
+
* transcription direction:
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
** NEGATIVE
−
** Beta-ketoacyl synthase, N-terminal
+
* right end position:
−
** beta-ketoacyl synthase, partial
+
** 111058
−
** Thiolase-like, subgroup
+
* centisome position:
−
* ec number:
+
** 2.2550125   
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0162_0001
 +
** Esi0162_0001
 +
** TRE
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[TREHALA-RXN]]
−
** 1 [[Cis-Delta7-tetradecenoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-oxo-cis-D9-hexadecenoyl-ACPs]][c]
+
** esiliculosus_genome
−
* With common name(s):
+
***ec-number
−
** 1 a cis-Δ7-tetradecenoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-cis-Δ9-hexadecenoyl-[acp][c]
+
== Pathways associated ==
−
 
+
* [[PWY0-1182]]
−
== Genes associated with this reaction  ==
+
* [[PWY0-1466]]
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-27_002090]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-27_003480]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-12_000650]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-12_000640]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=101833}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
{{#set: right end position=111058}}
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
{{#set: centisome position=2.2550125    }}
−
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: common name=Esi_0162_0001|Esi0162_0001|TRE}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: reaction associated=TREHALA-RXN}}
−
{{#set: gene associated=Ec-27_002090|Ec-27_003480|Ec-12_000650|Ec-12_000640}}
+
{{#set: pathway associated=PWY0-1182|PWY0-1466}}
−
{{#set: in pathway=PWY-6282}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:18, 17 March 2018

Gene Ec-22_000080

  • left end position:
    • 101833
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 111058
  • centisome position:
    • 2.2550125
  • Synonym(s):
    • Esi_0162_0001
    • Esi0162_0001
    • TRE

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=COBALSYN-PWY&oldid=12449"