Difference between revisions of "RXN-14785"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IGPSYN-RXN IGPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldolase-type TIM barrel...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTSYN-RXN ACETOOHBUTSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-aceto-2-h...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IGPSYN-RXN IGPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOOHBUTSYN-RXN ACETOOHBUTSYN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aldolase-type TIM barrel
+
** 2-aceto-2-hydroxy-butyrate synthase
−
** Indole-3-glycerol phosphate synthase
+
−
** FIST domain, N-terminal
+
−
** indole-3-glycerol-phosphate synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.48 EC-4.1.1.48]
+
** [http://enzyme.expasy.org/EC/2.2.1.6 EC-2.2.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[INDOLE-3-GLYCEROL-P]][c]
+
** 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[2-ACETO-2-HYDROXY-BUTYRATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c] '''+''' 1 H+[c] '''=>''' 1 H2O[c] '''+''' 1 CO2[c] '''+''' 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c]
+
** 1 2-oxobutanoate[c] '''+''' 1 pyruvate[c] '''+''' 1 H+[c] '''=>''' 1 (S)-2-aceto-2-hydroxybutanoate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-27_004020]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-11_002820]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[aragem]]
 
−
* [[Ec-08_003030]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-08_003020]]
 
−
** ESILICULOSUS_GENOME
 
−
***GO-TERM
 
−
* [[Ec-03_003850]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
+
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23476 23476]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27654 27654]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03508 R03508]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08648 R08648]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P42393 P42393]
+
** [http://www.uniprot.org/uniprot/Q59950 Q59950]
−
** [http://www.uniprot.org/uniprot/P20577 P20577]
+
** [http://www.uniprot.org/uniprot/P42463 P42463]
−
** [http://www.uniprot.org/uniprot/P18304 P18304]
+
** [http://www.uniprot.org/uniprot/Q8XAV3 Q8XAV3]
−
** [http://www.uniprot.org/uniprot/Q06121 Q06121]
+
** [http://www.uniprot.org/uniprot/P27868 P27868]
−
** [http://www.uniprot.org/uniprot/Q9V1G3 Q9V1G3]
+
** [http://www.uniprot.org/uniprot/P45260 P45260]
−
** [http://www.uniprot.org/uniprot/P20578 P20578]
+
** [http://www.uniprot.org/uniprot/Q57625 Q57625]
−
** [http://www.uniprot.org/uniprot/Q9PI11 Q9PI11]
+
** [http://www.uniprot.org/uniprot/P37251 P37251]
−
** [http://www.uniprot.org/uniprot/Q58328 Q58328]
+
** [http://www.uniprot.org/uniprot/P45261 P45261]
−
** [http://www.uniprot.org/uniprot/Q9JSN4 Q9JSN4]
+
** [http://www.uniprot.org/uniprot/O27493 O27493]
−
** [http://www.uniprot.org/uniprot/P03964 P03964]
+
** [http://www.uniprot.org/uniprot/O66759 O66759]
−
** [http://www.uniprot.org/uniprot/P00910 P00910]
+
** [http://www.uniprot.org/uniprot/Q9PHU2 Q9PHU2]
−
** [http://www.uniprot.org/uniprot/P00909 P00909]
+
** [http://www.uniprot.org/uniprot/O05031 O05031]
−
** [http://www.uniprot.org/uniprot/P00911 P00911]
+
** [http://www.uniprot.org/uniprot/Q57725 Q57725]
−
** [http://www.uniprot.org/uniprot/P17217 P17217]
+
** [http://www.uniprot.org/uniprot/Q9PHU1 Q9PHU1]
−
** [http://www.uniprot.org/uniprot/P20409 P20409]
+
** [http://www.uniprot.org/uniprot/Q9JTI1 Q9JTI1]
−
** [http://www.uniprot.org/uniprot/P00937 P00937]
+
** [http://www.uniprot.org/uniprot/Q58077 Q58077]
−
** [http://www.uniprot.org/uniprot/P00908 P00908]
+
** [http://www.uniprot.org/uniprot/O28554 O28554]
−
** [http://www.uniprot.org/uniprot/P05328 P05328]
+
** [http://www.uniprot.org/uniprot/O53554 O53554]
−
** [http://www.uniprot.org/uniprot/P06531 P06531]
+
** [http://www.uniprot.org/uniprot/Q04789 Q04789]
−
** [http://www.uniprot.org/uniprot/P18483 P18483]
+
** [http://www.uniprot.org/uniprot/Q9JRF4 Q9JRF4]
−
** [http://www.uniprot.org/uniprot/P25170 P25170]
+
** [http://www.uniprot.org/uniprot/Q59272 Q59272]
−
** [http://www.uniprot.org/uniprot/P26938 P26938]
+
** [http://www.uniprot.org/uniprot/P27696 P27696]
−
** [http://www.uniprot.org/uniprot/P24773 P24773]
+
** [http://www.uniprot.org/uniprot/Q59498 Q59498]
−
** [http://www.uniprot.org/uniprot/Q01999 Q01999]
+
** [http://www.uniprot.org/uniprot/Q9RFQ7 Q9RFQ7]
−
** [http://www.uniprot.org/uniprot/Q9YGB5 Q9YGB5]
+
** [http://www.uniprot.org/uniprot/Q05767 Q05767]
−
** [http://www.uniprot.org/uniprot/Q9S591 Q9S591]
+
** [http://www.uniprot.org/uniprot/P40811 P40811]
−
** [http://www.uniprot.org/uniprot/Q9X7C7 Q9X7C7]
+
** [http://www.uniprot.org/uniprot/P21622 P21622]
−
** [http://www.uniprot.org/uniprot/Q92370 Q92370]
+
** [http://www.uniprot.org/uniprot/P27818 P27818]
−
** [http://www.uniprot.org/uniprot/Q9ZFA7 Q9ZFA7]
+
** [http://www.uniprot.org/uniprot/Q41768 Q41768]
−
** [http://www.uniprot.org/uniprot/P94327 P94327]
+
** [http://www.uniprot.org/uniprot/Q41769 Q41769]
 +
** [http://www.uniprot.org/uniprot/P69684 P69684]
 +
** [http://www.uniprot.org/uniprot/P27819 P27819]
 +
** [http://www.uniprot.org/uniprot/Q9R586 Q9R586]
 +
** [http://www.uniprot.org/uniprot/Q02137 Q02137]
 +
** [http://www.uniprot.org/uniprot/Q02140 Q02140]
 +
** [http://www.uniprot.org/uniprot/P36620 P36620]
 +
** [http://www.uniprot.org/uniprot/Q42767 Q42767]
 +
** [http://www.uniprot.org/uniprot/Q42768 Q42768]
 +
** [http://www.uniprot.org/uniprot/Q49865 Q49865]
 +
** [http://www.uniprot.org/uniprot/O22547 O22547]
 +
** [http://www.uniprot.org/uniprot/O49229 O49229]
 +
** [http://www.uniprot.org/uniprot/O22578 O22578]
 +
** [http://www.uniprot.org/uniprot/O49210 O49210]
 +
** [http://www.uniprot.org/uniprot/Q60021 Q60021]
 +
** [http://www.uniprot.org/uniprot/P07342 P07342]
 +
** [http://www.uniprot.org/uniprot/P00892 P00892]
 +
** [http://www.uniprot.org/uniprot/P08142 P08142]
 +
** [http://www.uniprot.org/uniprot/P0ADF8 P0ADF8]
 +
** [http://www.uniprot.org/uniprot/P00894 P00894]
 +
** [http://www.uniprot.org/uniprot/P00893 P00893]
 +
** [http://www.uniprot.org/uniprot/P17597 P17597]
 +
** [http://www.uniprot.org/uniprot/P09342 P09342]
 +
** [http://www.uniprot.org/uniprot/P09114 P09114]
 +
** [http://www.uniprot.org/uniprot/P14874 P14874]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aldolase-type TIM barrel}}
+
{{#set: common name=2-aceto-2-hydroxy-butyrate synthase}}
−
{{#set: common name=Indole-3-glycerol phosphate synthase}}
+
{{#set: ec number=EC-2.2.1.6}}
−
{{#set: common name=FIST domain, N-terminal}}
+
{{#set: in pathway=PWY-5103|ILEUSYN-PWY|PWY-5101|PWY-5104}}
−
{{#set: common name=indole-3-glycerol-phosphate synthase}}
+
−
{{#set: ec number=EC-4.1.1.48}}
+
−
{{#set: gene associated=Ec-27_004020|Ec-11_002820|Ec-08_003030|Ec-08_003020|Ec-03_003850}}
+
−
{{#set: in pathway=TRPSYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:18, 17 March 2018

Reaction ACETOOHBUTSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-aceto-2-hydroxy-butyrate synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14785&oldid=12480"