Difference between revisions of "PWY-6498"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINALDOL-RXN H2NEOPTERINALDOL-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://en...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINALDOL-RXN H2NEOPTERINALDOL-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://enzyme.expasy.org/EC/4.1.2.25 EC-4.1.2.25]
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* common name:
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** 2-oxoglutarate decarboxylation to succinyl-CoA
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* Synonym(s):
 
* Synonym(s):
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** 2-oxoglutarate dehydrogenase complex
 
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** 2-ketoglutarate dehydrogenase complex
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[2OXOGLUTDECARB-RXN]]
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** 1 [[DIHYDRO-NEO-PTERIN]][c] '''<=>''' 1 [[GLYCOLALDEHYDE]][c] '''+''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c]
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* [[RXN-7716]]
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* With common name(s):
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* [[RXN0-1147]]
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** 1 7,8-dihydroneopterin[c] '''<=>''' 1 glycolaldehyde[c] '''+''' 1 6-(hydroxymethyl)-7,8-dihydropterin[c]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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== Pathways ==
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* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6148]], tetrahydromethanopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6148 PWY-6148]
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** '''2''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5084 PWY-5084]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10540 10540]
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03504 R03504]
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{{#set: taxonomic range=TAX-2157}}
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* UNIPROT:
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{{#set: common name=2-oxoglutarate decarboxylation to succinyl-CoA}}
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** [http://www.uniprot.org/uniprot/P22291 P22291]
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{{#set: common name=2-oxoglutarate dehydrogenase complex|2-ketoglutarate dehydrogenase complex}}
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** [http://www.uniprot.org/uniprot/Q9CGE4 Q9CGE4]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/Q9JUL3 Q9JUL3]
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{{#set: reaction not found=3}}
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** [http://www.uniprot.org/uniprot/P28823 P28823]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P29251 P29251]
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** [http://www.uniprot.org/uniprot/P53848 P53848]
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** [http://www.uniprot.org/uniprot/O75013 O75013]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-4.1.2.25}}
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{{#set: in pathway=PWY-7539|PWY-6148|PWY-6797|PWY-6147}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}

Revision as of 21:23, 17 March 2018

Reaction H2NEOPTERINALDOL-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6148, tetrahydromethanopterin biosynthesis: PWY-6148
    • 2 reactions found over 14 reactions in the full pathway
  • PWY-6797, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: PWY-6147
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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