Difference between revisions of "PWY-5136"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] == * direction: ** LEFT-TO-RIGHT * common name: ** RNA helicase family protein...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5298 PWY-5298] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* common name:
 
* common name:
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** L-lysine degradation VI
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** RNA helicase family protein
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** Probable RNA helicase SDE3
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.4.13 EC-3.6.4.13]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RXN-8173]]
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** 1 [[WATER]][c] '''+''' 1 [[Wound-RNA]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Unwound-RNA]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=L-LYSINE-AMINOTRANSFERASE-RXN L-LYSINE-AMINOTRANSFERASE-RXN]
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** 1 H2O[c] '''+''' 1 wound RNA[c] '''+''' 1 ATP[c] '''=>''' 1 an unwound RNA[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8162 RXN-8162]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_002420]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-07_001080]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-201174}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-1224}}
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{{#set: common name=RNA helicase family protein}}
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{{#set: common name=L-lysine degradation VI}}
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{{#set: common name=Probable RNA helicase SDE3}}
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{{#set: reaction found=1}}
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{{#set: ec number=EC-3.6.4.13}}
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{{#set: reaction not found=3}}
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{{#set: gene associated=Ec-12_002420|Ec-07_001080}}
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{{#set: completion rate=33.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 21:26, 17 March 2018

Reaction RXN-11109

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA helicase family protein
    • Probable RNA helicase SDE3
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 wound RNA[c] + 1 ATP[c] => 1 an unwound RNA[c] + 1 phosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5136&oldid=12987"