Difference between revisions of "CARBODEHYDRAT-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-06_004240 == * left end position: ** 3536082 * transcription direction: ** NEGATIVE * right end position: ** 3539535 * centisome position: ** 40.3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCIT-CLEAV-RXN ISOCIT-CLEAV-RXN] == * direction: ** REVERSIBLE * common name: ** isocitrate lyase...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-06_004240 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCIT-CLEAV-RXN ISOCIT-CLEAV-RXN] ==
−
* left end position:
+
* direction:
−
** 3536082
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** isocitrate lyase
−
* right end position:
+
* ec number:
−
** 3539535
+
** [http://enzyme.expasy.org/EC/4.1.3.1 EC-4.1.3.1]
−
* centisome position:
+
−
** 40.376568   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0062_0099
 
−
** Esi0062_0099
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN-12086]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[GLYOX]][c] '''+''' 1 [[SUC]][c]
−
***go-term
+
* With common name(s):
−
* [[RXN-12579]]
+
** 1 D-threo-isocitrate[c] '''<=>''' 1 glyoxylate[c] '''+''' 1 succinate[c]
−
** esiliculosus_genome
+
 
−
***go-term
+
== Genes associated with this reaction  ==
−
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** esiliculosus_genome
+
* [[Ec-12_007550]]
−
***go-term
+
** ESILICULOSUS_GENOME
−
== Pathways associated ==
+
***GO-TERM
−
* [[LIPAS-PWY]]
+
== Pathways  ==
−
* [[PWY-6857]]
+
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=3536082}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13245 13245]
−
{{#set: right end position=3539535}}
+
* PIR:
−
{{#set: centisome position=40.376568    }}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41338 A41338]
−
{{#set: common name=Esi_0062_0099|Esi0062_0099}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40713 I40713]
−
{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JA0155 JA0155]
−
{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC6182 JC6182]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26857 S26857]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26858 S26858]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39953 S39953]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S52819 S52819]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S77654 S77654]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04115 T04115]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T06353 T06353]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07631 T07631]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07632 T07632]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08046 T08046]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09774 T09774]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09779 T09779]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11209 T11209]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZBYI WZBYI]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCKI WZCKI]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCNIU WZCNIU]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCSI WZCSI]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZECIC WZECIC]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZRPI WZRPI]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00479 R00479]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P28467 P28467]
 +
** [http://www.uniprot.org/uniprot/P42449 P42449]
 +
** [http://www.uniprot.org/uniprot/P20699 P20699]
 +
** [http://www.uniprot.org/uniprot/O13439 O13439]
 +
** [http://www.uniprot.org/uniprot/P28299 P28299]
 +
** [http://www.uniprot.org/uniprot/Q12031 Q12031]
 +
** [http://www.uniprot.org/uniprot/P46831 P46831]
 +
** [http://www.uniprot.org/uniprot/O24588 O24588]
 +
** [http://www.uniprot.org/uniprot/P49297 P49297]
 +
** [http://www.uniprot.org/uniprot/P45456 P45456]
 +
** [http://www.uniprot.org/uniprot/P45457 P45457]
 +
** [http://www.uniprot.org/uniprot/Q39577 Q39577]
 +
** [http://www.uniprot.org/uniprot/Q41084 Q41084]
 +
** [http://www.uniprot.org/uniprot/Q43097 Q43097]
 +
** [http://www.uniprot.org/uniprot/P28240 P28240]
 +
** [http://www.uniprot.org/uniprot/P20014 P20014]
 +
** [http://www.uniprot.org/uniprot/P17069 P17069]
 +
** [http://www.uniprot.org/uniprot/P15479 P15479]
 +
** [http://www.uniprot.org/uniprot/P0A9G6 P0A9G6]
 +
** [http://www.uniprot.org/uniprot/P25248 P25248]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=isocitrate lyase}}
 +
{{#set: ec number=EC-4.1.3.1}}
 +
{{#set: gene associated=Ec-12_007550}}
 +
{{#set: in pathway=P105-PWY|GLYOXYLATE-BYPASS|PWY-6969}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 22:31, 17 March 2018

Reaction ISOCIT-CLEAV-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • isocitrate lyase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-threo-isocitrate[c] <=> 1 glyoxylate[c] + 1 succinate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P105-PWY, TCA cycle IV (2-oxoglutarate decarboxylase): P105-PWY
    • 9 reactions found over 11 reactions in the full pathway
  • GLYOXYLATE-BYPASS, glyoxylate cycle: GLYOXYLATE-BYPASS
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6969, TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): PWY-6969
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CARBODEHYDRAT-RXN&oldid=13338"