Difference between revisions of "Ec-21 001480"

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(Created page with "Category:Gene == Gene Ec-11_005510 == * left end position: ** 5511573 * transcription direction: ** POSITIVE * right end position: ** 5516739 * centisome position: ** 87.6...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBPSYN-RXN CARBPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl-phosphate s...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-11_005510 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBPSYN-RXN CARBPSYN-RXN] ==
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* left end position:
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* direction:
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** 5511573
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** carbamoyl-phosphate synthase (glutamine-hydrolyzing)
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* right end position:
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* ec number:
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** 5516739
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** [http://enzyme.expasy.org/EC/6.3.5.5 EC-6.3.5.5]
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* centisome position:
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−
** 87.62914   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0031_0033
 
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** Esi0031_0033
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GDPMANDEHYDRA-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[GLN]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[WATER]][c] '''+''' 2 [[ATP]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[PROTON]][c]
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***go-term
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* With common name(s):
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** [[pantograph]]-[[aragem]]
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** 1 L-glutamine[c] '''+''' 1 hydrogen carbonate[c] '''+''' 1 H2O[c] '''+''' 2 ATP[c] '''=>''' 2 ADP[c] '''+''' 1 carbamoyl phosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 phosphate[c] '''+''' 2 H+[c]
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== Pathways associated ==
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* [[GDPRHAMSYN-PWY]]
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== Genes associated with this reaction  ==
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* [[PWY-66]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5740]]
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* [[Ec-10_006110]]
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* [[PWY-7573]]
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** ESILICULOSUS_GENOME
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* [[PWY-5738]]
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***GO-TERM
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* [[PWY-5739]]
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== Pathways  ==
 +
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5686]], UMP biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5511573}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00575 R00575]
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{{#set: right end position=5516739}}
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* UNIPROT:
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{{#set: centisome position=87.62914    }}
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** [http://www.uniprot.org/uniprot/P08955 P08955]
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{{#set: common name=Esi_0031_0033|Esi0031_0033}}
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** [http://www.uniprot.org/uniprot/P13258 P13258]
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{{#set: reaction associated=GDPMANDEHYDRA-RXN}}
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** [http://www.uniprot.org/uniprot/P38099 P38099]
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{{#set: pathway associated=GDPRHAMSYN-PWY|PWY-66|PWY-5740|PWY-7573|PWY-5738|PWY-5739}}
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** [http://www.uniprot.org/uniprot/P27708 P27708]
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** [http://www.uniprot.org/uniprot/Q91437 Q91437]
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** [http://www.uniprot.org/uniprot/O28994 O28994]
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** [http://www.uniprot.org/uniprot/P57689 P57689]
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** [http://www.uniprot.org/uniprot/P38098 P38098]
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** [http://www.uniprot.org/uniprot/Q9WZ27 Q9WZ27]
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** [http://www.uniprot.org/uniprot/Q9PMG8 Q9PMG8]
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** [http://www.uniprot.org/uniprot/Q9JXW8 Q9JXW8]
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** [http://www.uniprot.org/uniprot/Q9JVZ6 Q9JVZ6]
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** [http://www.uniprot.org/uniprot/P25993 P25993]
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** [http://www.uniprot.org/uniprot/Q9PIL7 Q9PIL7]
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** [http://www.uniprot.org/uniprot/P25994 P25994]
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** [http://www.uniprot.org/uniprot/Q9JW02 Q9JW02]
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** [http://www.uniprot.org/uniprot/O25577 O25577]
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** [http://www.uniprot.org/uniprot/P52557 P52557]
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** [http://www.uniprot.org/uniprot/P46537 P46537]
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** [http://www.uniprot.org/uniprot/P18185 P18185]
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** [http://www.uniprot.org/uniprot/P07259 P07259]
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** [http://www.uniprot.org/uniprot/P20054 P20054]
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** [http://www.uniprot.org/uniprot/P05990 P05990]
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** [http://www.uniprot.org/uniprot/P14845 P14845]
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** [http://www.uniprot.org/uniprot/Q06950 Q06950]
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** [http://www.uniprot.org/uniprot/Q92115 Q92115]
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** [http://www.uniprot.org/uniprot/Q09794 Q09794]
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** [http://www.uniprot.org/uniprot/P03965 P03965]
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** [http://www.uniprot.org/uniprot/P07258 P07258]
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** [http://www.uniprot.org/uniprot/P00968 P00968]
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** [http://www.uniprot.org/uniprot/P0A6F1 P0A6F1]
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** [http://www.uniprot.org/uniprot/P93345 P93345]
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** [http://www.uniprot.org/uniprot/Q27732 Q27732]
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** [http://www.uniprot.org/uniprot/Q27448 Q27448]
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** [http://www.uniprot.org/uniprot/O50236 O50236]
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** [http://www.uniprot.org/uniprot/O94313 O94313]
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** [http://www.uniprot.org/uniprot/Q59968 Q59968]
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** [http://www.uniprot.org/uniprot/Q59969 Q59969]
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** [http://www.uniprot.org/uniprot/O50301 O50301]
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** [http://www.uniprot.org/uniprot/O50302 O50302]
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{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=carbamoyl-phosphate synthase (glutamine-hydrolyzing)}}
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{{#set: ec number=EC-6.3.5.5}}
 +
{{#set: gene associated=Ec-10_006110}}
 +
{{#set: in pathway=PWY-5154|PWY-7400|PWY-5686|ARGSYNBSUB-PWY|ARGSYN-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 22:34, 17 March 2018

Reaction CARBPSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carbamoyl-phosphate synthase (glutamine-hydrolyzing)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 hydrogen carbonate[c] + 1 H2O[c] + 2 ATP[c] => 2 ADP[c] + 1 carbamoyl phosphate[c] + 1 L-glutamate[c] + 1 phosphate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline): PWY-5154
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7400, L-arginine biosynthesis IV (archaebacteria): PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5686, UMP biosynthesis: PWY-5686
    • 6 reactions found over 6 reactions in the full pathway
  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle): ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine): ARGSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_001480&oldid=13536"