Difference between revisions of "Ec-21 004360"

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(Created page with "Category:Gene == Gene Ec-01_003190 == * left end position: ** 2718272 * transcription direction: ** NEGATIVE * right end position: ** 2719816 * centisome position: ** 26.3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-115 RXN-115] == * direction: ** LEFT-TO-RIGHT * common name: ** Non-haem dioxygenase N-terminal...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-01_003190 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-115 RXN-115] ==
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* left end position:
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* direction:
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** 2718272
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Non-haem dioxygenase N-terminal domain
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* right end position:
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* ec number:
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** 2719816
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** [http://enzyme.expasy.org/EC/1.14.11.13 EC-1.14.11.13]
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* centisome position:
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** 26.342821   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0003_0205
 
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** Esi0003_0205
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-139]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-204]][c] '''+''' 1 [[SUC]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin A1[c] '''=>''' 1 CO2[c] '''+''' 1 gibberellin A8[c] '''+''' 1 succinate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-08_003510]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_002750]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_002760]]
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY-102]], gibberellin inactivation I (2β-hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2718272}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15005 15005]
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{{#set: right end position=2719816}}
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* LIGAND-RXN:
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{{#set: centisome position=26.342821    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03008 R03008]
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{{#set: common name=Esi_0003_0205|Esi0003_0205}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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{{#set: common name=Non-haem dioxygenase N-terminal domain}}
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{{#set: ec number=EC-1.14.11.13}}
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{{#set: gene associated=Ec-08_003510|Ec-19_002750|Ec-19_002760}}
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{{#set: in pathway=PWY-102}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 22:36, 17 March 2018

Reaction RXN-115

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Non-haem dioxygenase N-terminal domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-102, gibberellin inactivation I (2β-hydroxylation): PWY-102
    • 4 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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