Difference between revisions of "Ec-12 003010"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] == * direction: ** REVERSIBLE * common name: *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-ACP-TRANSACYL-RXN MALONYL-COA-ACP-TRANSACYL-RXN] == * direction: ** REVERSIBLE * common...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-ACP-TRANSACYL-RXN MALONYL-COA-ACP-TRANSACYL-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Tetrahydrofolate dehydrogenase/cyclohydrolase
+
** Malonyl CoA-acyl carrier protein transacylase
−
** Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.9 EC-3.5.4.9]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.39 EC-2.3.1.39]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[ACP]][c] '''+''' 1 [[MALONYL-COA]][c] '''<=>''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 1 H2O[c] '''<=>''' 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 H+[c]
+
** 1 a holo-[acyl-carrier protein][c] '''+''' 1 malonyl-CoA[c] '''<=>''' 1 a malonyl-[acp][c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-15_001370]]
+
* [[Ec-05_003450]]
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-14_004070]]
+
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
+
* [[PWY-6799]], fatty acid biosynthesis (plant mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6799 PWY-6799]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
+
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
+
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5030]], L-histidine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5030 PWY-5030]
+
* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
+
−
** '''4''' reactions found over '''17''' reactions in the full pathway
+
−
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
+
−
** '''8''' reactions found over '''24''' reactions in the full pathway
+
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
+
−
** '''12''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6613 PWY-6613]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23700 23700]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01655 R01655]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01626 R01626]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P09440 P09440]
+
** [http://www.uniprot.org/uniprot/P72391 P72391]
−
** [http://www.uniprot.org/uniprot/P07245 P07245]
+
** [http://www.uniprot.org/uniprot/P49327 P49327]
−
** [http://www.uniprot.org/uniprot/P11586 P11586]
+
** [http://www.uniprot.org/uniprot/O34825 O34825]
−
** [http://www.uniprot.org/uniprot/P18155 P18155]
+
** [http://www.uniprot.org/uniprot/Q9RT24 Q9RT24]
−
** [http://www.uniprot.org/uniprot/P44313 P44313]
+
** [http://www.uniprot.org/uniprot/Q9JW58 Q9JW58]
−
** [http://www.uniprot.org/uniprot/P47259 P47259]
+
** [http://www.uniprot.org/uniprot/P0AAI9 P0AAI9]
−
** [http://www.uniprot.org/uniprot/P13995 P13995]
+
** [http://www.uniprot.org/uniprot/O24916 O24916]
−
** [http://www.uniprot.org/uniprot/P54382 P54382]
+
** [http://www.uniprot.org/uniprot/Q9JXR4 Q9JXR4]
−
** [http://www.uniprot.org/uniprot/O67736 O67736]
+
** [http://www.uniprot.org/uniprot/Q9ZCJ6 Q9ZCJ6]
−
** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
+
** [http://www.uniprot.org/uniprot/Q9YBK5 Q9YBK5]
−
** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
+
** [http://www.uniprot.org/uniprot/Q9PJ11 Q9PJ11]
−
** [http://www.uniprot.org/uniprot/P24186 P24186]
+
** [http://www.uniprot.org/uniprot/P43712 P43712]
−
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
+
** [http://www.uniprot.org/uniprot/Q9Z8P1 Q9Z8P1]
−
** [http://www.uniprot.org/uniprot/Q60006 Q60006]
+
** [http://www.uniprot.org/uniprot/O67041 O67041]
−
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
+
** [http://www.uniprot.org/uniprot/Q9ZMY1 Q9ZMY1]
−
** [http://www.uniprot.org/uniprot/P51696 P51696]
+
** [http://www.uniprot.org/uniprot/Q9PKF6 Q9PKF6]
−
** [http://www.uniprot.org/uniprot/O68031 O68031]
+
** [http://www.uniprot.org/uniprot/P63458 P63458]
−
** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
+
** [http://www.uniprot.org/uniprot/O84241 O84241]
−
** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
+
** [http://www.uniprot.org/uniprot/Q9WZQ5 Q9WZQ5]
 +
** [http://www.uniprot.org/uniprot/P71019 P71019]
 +
** [http://www.uniprot.org/uniprot/P07149 P07149]
 +
** [http://www.uniprot.org/uniprot/P73242 P73242]
 +
** [http://www.uniprot.org/uniprot/Q8RU07 Q8RU07]
 +
** [http://www.uniprot.org/uniprot/Q54205 Q54205]
 +
** [http://www.uniprot.org/uniprot/O54437 O54437]
 +
** [http://www.uniprot.org/uniprot/Q56692 Q56692]
 +
** [http://www.uniprot.org/uniprot/O13698 O13698]
 +
** [http://www.uniprot.org/uniprot/Q9RA34 Q9RA34]
 +
** [http://www.uniprot.org/uniprot/O69476 O69476]
 +
** [http://www.uniprot.org/uniprot/P12276 P12276]
 +
** [http://www.uniprot.org/uniprot/P12785 P12785]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Tetrahydrofolate dehydrogenase/cyclohydrolase}}
+
{{#set: common name=Malonyl CoA-acyl carrier protein transacylase}}
−
{{#set: common name=Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: ec number=EC-3.5.4.9}}
+
{{#set: ec number=EC-2.3.1.85}}
−
{{#set: gene associated=Ec-15_001370|Ec-14_004070}}
+
{{#set: ec number=EC-2.3.1.39}}
−
{{#set: in pathway=PWY-1722|PWY-3841|1CMET2-PWY|PWY-5030|P164-PWY|CODH-PWY|PWY-5497|PWY-2201|PWY-6613}}
+
{{#set: gene associated=Ec-05_003450}}
 +
{{#set: in pathway=PWY-6799|PWY-7388|PWY-4381}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 22:52, 17 March 2018

Reaction MALONYL-COA-ACP-TRANSACYL-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a holo-[acyl-carrier protein][c] + 1 malonyl-CoA[c] <=> 1 a malonyl-[acp][c] + 1 coenzyme A[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6799, fatty acid biosynthesis (plant mitochondria): PWY-6799
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation I: PWY-4381
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_003010&oldid=14800"