Difference between revisions of "PSII-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9635 RXN-9635] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-octadec-2-enoyl-[acyl-c...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] == * direction: ** REVERSIBLE * common name: ** IMP cy...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9635 RXN-9635] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** trans-octadec-2-enoyl-[acyl-carrier-protein] reductase
+
** IMP cyclohydrolase
−
** Glucose/ribitol dehydrogenase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.9 EC-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/3.5.4.10 EC-3.5.4.10]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADH]][c] '''+''' 1 [[Octadec-2-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Stearoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
+
** 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADH[c] '''+''' 1 a trans-octadec-2-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a stearoyl-[acp][c] '''+''' 1 NAD+[c]
+
** 1 IMP[c] '''+''' 1 H2O[c] '''<=>''' 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-27_002470]]
+
* [[Ec-11_005390]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***EC-NUMBER
+
***GO-TERM
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5989]], stearate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5989 PWY-5989]
+
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=trans-octadec-2-enoyl-[acyl-carrier-protein] reductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18445 18445]
−
{{#set: common name=Glucose/ribitol dehydrogenase}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-1.3.1.9}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01127 R01127]
−
{{#set: gene associated=Ec-27_002470}}
+
* UNIPROT:
−
{{#set: in pathway=PWY-5989}}
+
** [http://www.uniprot.org/uniprot/P43852 P43852]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P12048 P12048]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P31335 P31335]
−
{{#set: reconstruction source=aragem}}
+
** [http://www.uniprot.org/uniprot/P26978 P26978]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P15639 P15639]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
−
{{#set: reconstruction source=esiliculosus_genome}}
+
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
 +
** [http://www.uniprot.org/uniprot/P31939 P31939]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=IMP cyclohydrolase}}
 +
{{#set: ec number=EC-3.5.4.10}}
 +
{{#set: gene associated=Ec-11_005390}}
 +
{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 22:53, 17 March 2018

Reaction IMPCYCLOHYDROLASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • IMP cyclohydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6123, inosine-5'-phosphate biosynthesis I: PWY-6123
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II: PWY-6124
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7234, inosine-5'-phosphate biosynthesis III: PWY-7234
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PSII-RXN&oldid=14905"