Difference between revisions of "Ec-05 000260"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7719 RXN-7719] == * direction: ** REVERSIBLE * common name: ** dihydrolipoamide dehydrogenase *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYL-COA-OXIDASE-RXN ACYL-COA-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7719 RXN-7719] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYL-COA-OXIDASE-RXN ACYL-COA-OXIDASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** dihydrolipoamide dehydrogenase
+
** acyl-CoA oxidase, partial
−
** Branched chain alpha-keto acid dehydrogenase E1 beta subunit
+
** acyl-CoA oxidase
 +
** Acyl-CoA oxidase/dehydrogenase, central domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[BCAA-dehydrogenase-DH-lipoyl]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[ACYL-COA]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c]
+
** 1 oxygen[c] '''+''' 1 an acyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 a trans-2-enoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-25_000020]]
+
* [[Ec-08_006390]]
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-06_009010]]
+
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
−
* [[Ec-27_004160]]
+
* [[Ec-26_004320]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-22_002920]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5046 PWY-5046]
+
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* PIR:
−
{{#set: common name=dihydrolipoamide dehydrogenase}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52121 T52121]
−
{{#set: common name=Branched chain alpha-keto acid dehydrogenase E1 beta subunit}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52120 T52120]
−
{{#set: ec number=EC-1.8.1.4}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04418 T04418]
−
{{#set: gene associated=Ec-25_000020|Ec-06_009010|Ec-27_004160}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S64224 S64224]
−
{{#set: in pathway=PWY-5046}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40722 S40722]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXRTA2 OXRTA2]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXRTA1 OXRTA1]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX5 OXCKX5]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX4 OXCKX4]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX OXCKX]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKPM OXCKPM]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKP2 OXCKP2]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKAX OXCKAX]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4563 JC4563]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I38095 I38095]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B54942 B54942]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A54942 A54942]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00388 R00388]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q15067 Q15067]
 +
** [http://www.uniprot.org/uniprot/Q00468 Q00468]
 +
** [http://www.uniprot.org/uniprot/P06598 P06598]
 +
** [http://www.uniprot.org/uniprot/P11356 P11356]
 +
** [http://www.uniprot.org/uniprot/P07872 P07872]
 +
** [http://www.uniprot.org/uniprot/P34355 P34355]
 +
** [http://www.uniprot.org/uniprot/P13711 P13711]
 +
** [http://www.uniprot.org/uniprot/O23977 O23977]
 +
** [http://www.uniprot.org/uniprot/O65201 O65201]
 +
** [http://www.uniprot.org/uniprot/O65202 O65202]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=acyl-CoA oxidase, partial}}
 +
{{#set: common name=acyl-CoA oxidase}}
 +
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
 +
{{#set: ec number=EC-1.3.3.6}}
 +
{{#set: gene associated=Ec-08_006390|Ec-26_004320|Ec-22_002920}}
 +
{{#set: in pathway=PWY-7007}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:54, 17 March 2018

Reaction ACYL-COA-OXIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase, partial
    • acyl-CoA oxidase
    • Acyl-CoA oxidase/dehydrogenase, central domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7007, methyl ketone biosynthesis (engineered): PWY-7007
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






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