Difference between revisions of "RXN-8028"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] == * direction: ** LEFT-TO-RIGHT * common name: ** isovaleryl-CoA dehydrogenas...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] == * smiles: ** CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)
 +
* inchi key:
 +
** InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L
 
* common name:
 
* common name:
−
** isovaleryl-CoA dehydrogenase
+
** (3Z)-phytochromobilin
−
* ec number:
+
* molecular weight:
−
** [http://enzyme.expasy.org/EC/1.3.8.4 EC-1.3.8.4]
+
** 582.655   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[PROTON]][c] '''+''' 1 [[ISOVALERYL-COA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
+
* [[1.3.7.4-RXN]]
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 H+[c] '''+''' 1 isovaleryl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 3-methylcrotonyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-14_006780]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12276 12276]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25246013 25246013]
−
* LIGAND-RXN:
+
{{#set: smiles=CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04096 R04096]
+
{{#set: inchi key=InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=(3Z)-phytochromobilin}}
−
{{#set: common name=isovaleryl-CoA dehydrogenase}}
+
{{#set: molecular weight=582.655    }}
−
{{#set: ec number=EC-1.3.8.4}}
+
{{#set: produced by=1.3.7.4-RXN}}
−
{{#set: gene associated=Ec-14_006780}}
+
−
{{#set: in pathway=LEU-DEG2-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:58, 17 March 2018

Metabolite 3Z-PHYTOCHROMOBILIN

  • smiles:
    • CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)
  • inchi key:
    • InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L
  • common name:
    • (3Z)-phytochromobilin
  • molecular weight:
    • 582.655
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-8028&oldid=15284"