Difference between revisions of "RXN-8028"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] == * direction: ** LEFT-TO-RIGHT * common name: ** isovaleryl-CoA dehydrogenas...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] == * smiles: ** CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)
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* inchi key:
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** InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L
 
* common name:
 
* common name:
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** isovaleryl-CoA dehydrogenase
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** (3Z)-phytochromobilin
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.3.8.4 EC-1.3.8.4]
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** 582.655   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PROTON]][c] '''+''' 1 [[ISOVALERYL-COA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
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* [[1.3.7.4-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H+[c] '''+''' 1 isovaleryl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 3-methylcrotonyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-14_006780]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12276 12276]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25246013 25246013]
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* LIGAND-RXN:
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{{#set: smiles=CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04096 R04096]
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{{#set: inchi key=InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=(3Z)-phytochromobilin}}
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{{#set: common name=isovaleryl-CoA dehydrogenase}}
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{{#set: molecular weight=582.655    }}
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{{#set: ec number=EC-1.3.8.4}}
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{{#set: produced by=1.3.7.4-RXN}}
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{{#set: gene associated=Ec-14_006780}}
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{{#set: in pathway=LEU-DEG2-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:58, 17 March 2018

Metabolite 3Z-PHYTOCHROMOBILIN

  • smiles:
    • CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)
  • inchi key:
    • InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L
  • common name:
    • (3Z)-phytochromobilin
  • molecular weight:
    • 582.655
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)" cannot be used as a page name in this wiki.



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