Difference between revisions of "Ec-07 005410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxybenzoate non...")
 
(Created page with "Category:Gene == Gene Ec-19_004880 == * left end position: ** 5292615 * transcription direction: ** NEGATIVE * right end position: ** 5295205 * centisome position: ** 88.6...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.39-RXN 2.5.1.39-RXN] ==
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== Gene Ec-19_004880 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5292615
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* common name:
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* transcription direction:
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** 4-hydroxybenzoate nonaprenyltransferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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** 5295205
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* centisome position:
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** 88.6433   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0051_0092
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** Esi0051_0092
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** ALGD1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GDP-MANNOSE-6-DEHYDROGENASE-RXN]]
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** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[SOLANESYL-PYROPHOSPHATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[NONAPRENYL-4-HYDROXYBENZOATE]][c]
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** esiliculosus_genome
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* With common name(s):
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***ec-number
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** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-nonaprenyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-nonaprenyl-4-hydroxybenzoate[c]
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== Pathways associated ==
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* [[PWY-6073]]
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== Genes associated with this reaction  ==
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* [[PWY-6082]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-00_007360]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-5871]], ubiquinol-9 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5871 PWY-5871]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6978]], plastoquinol-9 biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6978 PWY-6978]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5856]], ubiquinol-9 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5856 PWY-5856]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5292615}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17709 17709]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5295205}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07273 R07273]
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{{#set: centisome position=88.6433    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0051_0092|Esi0051_0092|ALGD1}}
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{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
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{{#set: reaction associated=GDP-MANNOSE-6-DEHYDROGENASE-RXN}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: pathway associated=PWY-6073|PWY-6082}}
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{{#set: gene associated=Ec-00_007360}}
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{{#set: in pathway=PWY-5871|PWY-6978|PWY-5856}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 22:58, 17 March 2018

Gene Ec-19_004880

  • left end position:
    • 5292615
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5295205
  • centisome position:
    • 88.6433
  • Synonym(s):
    • Esi_0051_0092
    • Esi0051_0092
    • ALGD1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_005410&oldid=15286"