Difference between revisions of "CPD-19171"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_CPD-3 TransportSeed_CPD-3] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reactio...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] == * direction: ** REVERSIBLE * common name: ** ADP reductase ** Ribon...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TransportSeed_CPD-3 TransportSeed_CPD-3] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** ADP reductase
 +
** Ribonucleoside-diphosphate reductase small chain
 +
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
 +
** EsV-1-128
 +
** EsV-1-180
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[CPD-3]][e] '''=>''' 1.0 [[CPD-3]][c]
+
** 1 [[DADP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''<=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 molybdate[e] '''=>''' 1.0 molybdate[c]
+
** 1 dADP[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c] '''<=>''' 1 a reduced thioredoxin[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-17_003700]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-11_002180]]
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-06_005120]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-11_002170]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-21_002920]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-19_000440]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
** [[pantograph]]-[[aragem]]
 +
* [[Ec-06_005570]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[added to manage seeds from extracellular to cytosol compartment]]
+
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28034 28034]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction source=added to manage seeds from extracellular to cytosol compartment}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02017 R02017]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=ADP reductase}}
 +
{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
 +
{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
 +
{{#set: common name=EsV-1-128}}
 +
{{#set: common name=EsV-1-180}}
 +
{{#set: ec number=EC-1.17.4.1}}
 +
{{#set: gene associated=Ec-17_003700|Ec-11_002180|Ec-06_005120|Ec-11_002170|Ec-21_002920|Ec-19_000440|Ec-06_005570}}
 +
{{#set: in pathway=PWY-7220|PWY-7227}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 22:00, 17 March 2018

Reaction ADPREDUCT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ADP reductase
    • Ribonucleoside-diphosphate reductase small chain
    • ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
    • EsV-1-128
    • EsV-1-180
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dADP[c] + 1 H2O[c] + 1 an oxidized thioredoxin[c] <=> 1 a reduced thioredoxin[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7220, adenosine deoxyribonucleotides de novo biosynthesis II: PWY-7220
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7227, adenosine deoxyribonucleotides de novo biosynthesis: PWY-7227
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-19171&oldid=15388"