Difference between revisions of "RXN-15271"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] == * smiles: ** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O * inchi...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] ==
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* smiles:
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* direction:
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** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L
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* common name:
 
* common name:
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** dAMP
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** 6-phosphogluconate dehydrogenase, C-terminal-like
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* molecular weight:
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** 3-hydroxyacyl-CoA dehydrogenase
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** 329.208   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
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** 2'-deoxyadenosine 5'-phosphate
 
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** deoxyadenosine-phosphate
 
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** 2'-deoxyadenosine 5''-monophosphate
 
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** 2'-dAMP
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-14195]]
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** 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[K-HEXANOYL-COA]][c] '''=>''' 1 [[OH-HEXANOYL-COA]][c] '''+''' 1 [[NAD]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-14215]]
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** 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-oxohexanoyl-CoA[c] '''=>''' 1 (S)-3-hydroxyhexanoyl-CoA[c] '''+''' 1 NAD+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-19_005290]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-14_006530]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 653-63-4
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* RHEA:
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* BIGG : 34735
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31144 31144]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=22848660 22848660]
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** [http://www.genome.jp/dbget-bin/www_bget?R04748 R04748]
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* HMDB : HMDB00905
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00360 C00360]
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{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-1.1.1.35}}
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** [http://www.chemspider.com/Chemical-Structure.18735032.html 18735032]
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{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
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* CHEBI:
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{{#set: in pathway=PWY-6863}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58245 58245]
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{{#set: reconstruction category=orthology|annotation}}
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* METABOLIGHTS : MTBLC58245
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: smiles=C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: inchi key=InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L}}
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{{#set: common name=dAMP}}
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{{#set: molecular weight=329.208    }}
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{{#set: common name=2'-deoxyadenosine 5'-phosphate|deoxyadenosine-phosphate|2'-deoxyadenosine 5''-monophosphate|2'-dAMP}}
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{{#set: produced by=RXN-14195}}
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{{#set: consumed or produced by=RXN-14215}}
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Revision as of 22:03, 17 March 2018

Reaction RXN-12570

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 1 H+[c] + 1 3-oxohexanoyl-CoA[c] => 1 (S)-3-hydroxyhexanoyl-CoA[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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