Difference between revisions of "RXN-15271"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] == * smiles: ** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O * inchi...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12570 RXN-12570] ==
−
* smiles:
+
* direction:
−
** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L
+
 
* common name:
 
* common name:
−
** dAMP
+
** 6-phosphogluconate dehydrogenase, C-terminal-like
−
* molecular weight:
+
** 3-hydroxyacyl-CoA dehydrogenase
−
** 329.208   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
−
** 2'-deoxyadenosine 5'-phosphate
 
−
** deoxyadenosine-phosphate
 
−
** 2'-deoxyadenosine 5''-monophosphate
 
−
** 2'-dAMP
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-14195]]
+
** 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[K-HEXANOYL-COA]][c] '''=>''' 1 [[OH-HEXANOYL-COA]][c] '''+''' 1 [[NAD]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
−
* [[RXN-14215]]
+
** 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 3-oxohexanoyl-CoA[c] '''=>''' 1 (S)-3-hydroxyhexanoyl-CoA[c] '''+''' 1 NAD+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-19_005290]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-14_006530]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
** [[pantograph]]-[[aragem]]
 +
== Pathways  ==
 +
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 653-63-4
+
* RHEA:
−
* BIGG : 34735
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31144 31144]
−
* PUBCHEM:
+
* LIGAND-RXN:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=22848660 22848660]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04748 R04748]
−
* HMDB : HMDB00905
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* LIGAND-CPD:
+
{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00360 C00360]
+
{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
−
* CHEMSPIDER:
+
{{#set: ec number=EC-1.1.1.35}}
−
** [http://www.chemspider.com/Chemical-Structure.18735032.html 18735032]
+
{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
−
* CHEBI:
+
{{#set: in pathway=PWY-6863}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58245 58245]
+
{{#set: reconstruction category=orthology|annotation}}
−
* METABOLIGHTS : MTBLC58245
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: smiles=C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: inchi key=InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L}}
+
−
{{#set: common name=dAMP}}
+
−
{{#set: molecular weight=329.208    }}
+
−
{{#set: common name=2'-deoxyadenosine 5'-phosphate|deoxyadenosine-phosphate|2'-deoxyadenosine 5''-monophosphate|2'-dAMP}}
+
−
{{#set: produced by=RXN-14195}}
+
−
{{#set: consumed or produced by=RXN-14215}}
+

Revision as of 23:03, 17 March 2018

Reaction RXN-12570

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 1 H+[c] + 1 3-oxohexanoyl-CoA[c] => 1 (S)-3-hydroxyhexanoyl-CoA[c] + 1 NAD+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 7 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15271&oldid=15593"