Difference between revisions of "RXN-13519"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
(Created page with "Category:Gene == Gene Ec-27_004040 == * left end position: ** 3523577 * transcription direction: ** POSITIVE * right end position: ** 3531491 * centisome position: ** 54.6...")
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[[Category:Pathway]]
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[[Category:Gene]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475] ==
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== Gene Ec-27_004040 ==
* taxonomic range:
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* left end position:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** 3523577
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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* transcription direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** POSITIVE
* common name:
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* right end position:
** trans-lycopene biosynthesis II (plants)
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** 3531491
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* centisome position:
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** 54.629887   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0446
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** Esi0000_0446
  
== Reaction(s) found ==
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== Reactions associated ==
'''4''' reactions found over '''8''' reactions in the full pathway
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* Reaction: [[DIOHBUTANONEPSYN-RXN]]
* [[2.5.1.32-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
** 1 associated gene(s):
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*** Assignment: go-term
*** [[Ec-04_002810]]
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* Reaction: [[GTP-CYCLOHYDRO-II-RXN]]
** 1 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
*** [[annotation-esiliculosus_genome]]
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== Pathways associated ==
* [[RXN-11356]]
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* [[PWY-7539]]
** 1 associated gene(s):
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* [[PWY-6167]]
*** [[Ec-02_004660]]
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* [[PWY-6168]]
** 1 reconstruction source(s) associated:
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* [[RIBOSYN2-PWY]]
*** [[annotation-esiliculosus_genome]]
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* [[RXN-11357]]
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** 1 associated gene(s):
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*** [[Ec-02_004660]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXNARA-8002]]
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** 1 associated gene(s):
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*** [[Ec-04_002810]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11354 RXN-11354]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12243 RXN-12243]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8042 RXN-8042]
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== External links  ==
 
== External links  ==
* PLANTCYC : PWY-6475
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{{#set: left end position=3523577}}
{{#set: taxonomic range=TAX-1117}}
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{{#set: transcription direction=POSITIVE}}
{{#set: taxonomic range=TAX-2763}}
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{{#set: right end position=3531491}}
{{#set: taxonomic range=TAX-33090}}
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{{#set: centisome position=54.629887    }}
{{#set: common name=trans-lycopene biosynthesis II (plants)}}
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{{#set: common name=Esi_0000_0446|Esi0000_0446}}
{{#set: reaction found=4}}
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{{#set: reaction associated=DIOHBUTANONEPSYN-RXN|GTP-CYCLOHYDRO-II-RXN}}
{{#set: total reaction=8}}
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{{#set: pathway associated=PWY-7539|PWY-6167|PWY-6168|RIBOSYN2-PWY}}
{{#set: completion rate=50.0}}
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Revision as of 14:10, 21 March 2018

Gene Ec-27_004040

  • left end position:
    • 3523577
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3531491
  • centisome position:
    • 54.629887
  • Synonym(s):
    • Esi_0000_0446
    • Esi0000_0446

Reactions associated

Pathways associated

External links