Difference between revisions of "Ec-01 011640"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** gallate biosynthesis
+
** pyrroline-5-carboxylate reductase
 +
** Pyrroline-5-carboxylate reductase
 +
** NAD(P)-binding domain
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
+
** 2 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
−
** 4 associated gene(s):
+
* With common name(s):
−
*** [[Ec-07_000550]]
+
** 2 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
−
*** [[Ec-26_004120]]
+
 
−
*** [[Ec-02_006010]]
+
== Genes associated with this reaction  ==
−
*** [[Ec-14_005400]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** 2 reconstruction source(s) associated:
+
* Gene: [[Ec-07_007350]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
+
*** Assignment: GO-TERM
−
== Reaction(s) not found ==
+
* Gene: [[Ec-07_007360]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12131 RXN-12131]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12132 RXN-12132]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-07_007340]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-05_006410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-03_004680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4751}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-33090}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
−
{{#set: common name=gallate biosynthesis}}
+
* UNIPROT:
−
{{#set: reaction found=1}}
+
** [http://www.uniprot.org/uniprot/P32322 P32322]
−
{{#set: total reaction=3}}
+
** [http://www.uniprot.org/uniprot/P27771 P27771]
−
{{#set: completion rate=33.0}}
+
** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
 +
** [http://www.uniprot.org/uniprot/P14383 P14383]
 +
** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
 +
** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
 +
** [http://www.uniprot.org/uniprot/Q12740 Q12740]
 +
** [http://www.uniprot.org/uniprot/P22008 P22008]
 +
** [http://www.uniprot.org/uniprot/P54904 P54904]
 +
** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
 +
** [http://www.uniprot.org/uniprot/P17817 P17817]
 +
** [http://www.uniprot.org/uniprot/P32263 P32263]
 +
** [http://www.uniprot.org/uniprot/Q12641 Q12641]
 +
** [http://www.uniprot.org/uniprot/P46725 P46725]
 +
** [http://www.uniprot.org/uniprot/P74572 P74572]
 +
** [http://www.uniprot.org/uniprot/Q04708 Q04708]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=pyrroline-5-carboxylate reductase}}
 +
{{#set: common name=Pyrroline-5-carboxylate reductase}}
 +
{{#set: common name=NAD(P)-binding domain}}
 +
{{#set: ec number=EC-1.5.1.2}}
 +
{{#set: gene associated=Ec-07_007350|Ec-07_007360|Ec-07_007340|Ec-05_006410|Ec-03_004680}}
 +
{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:11, 21 March 2018

Reaction PYRROLINECARBREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyrroline-5-carboxylate reductase
    • Pyrroline-5-carboxylate reductase
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_011640&oldid=16403"