Difference between revisions of "VibB"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16133 RXN-16133] == * direction: ** REVERSIBLE * common name: ** 6-phosphogluconate dehydrogena...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16133 RXN-16133] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* common name:
 
* common name:
** urea cycle
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** 6-phosphogluconate dehydrogenase, C-terminal-like
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** 3-hydroxyacyl-CoA dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
** Krebs ornithine cycle
 
** Krebs-Henseleit cycle
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''5''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
* [[ARGINASE-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[L-3-HYDROXYACYL-COA]][c] '''<=>''' 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
** 2 associated gene(s):
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* With common name(s):
*** [[Ec-10_001100]]
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** 1 NAD+[c] '''+''' 1 a (3S)-3-hydroxyacyl-CoA[c] '''<=>''' 1 a 3-oxoacyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
*** [[Ec-22_003700]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
*** [[orthology-aragem]]
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* Gene: [[Ec-19_005290]]
* [[ARGSUCCINLYA-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
** 1 associated gene(s):
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*** Assignment: EC-NUMBER
*** [[Ec-12_005890]]
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* Gene: [[Ec-14_006530]]
** 2 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
*** [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
*** [[orthology-aragem]]
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== Pathways  ==
* [[ARGSUCCINSYN-RXN]]
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== Reconstruction information  ==
** 1 associated gene(s):
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* Category: [[annotation]]
*** [[Ec-01_001870]]
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** Source: [[annotation-esiliculosus_genome]]
** 2 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ORNCARBAMTRANSFER-RXN]]
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** 1 associated gene(s):
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*** [[Ec-00_004630]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-13202]]
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** 1 associated gene(s):
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*** [[Ec-10_006110]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
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{{#set: direction=REVERSIBLE}}
{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
{{#set: common name=urea cycle}}
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{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
{{#set: common name=Krebs ornithine cycle|Krebs-Henseleit cycle}}
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{{#set: ec number=EC-1.1.1.35}}
{{#set: reaction found=5}}
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{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
{{#set: total reaction=5}}
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{{#set: in pathway=}}
{{#set: completion rate=100.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:11, 21 March 2018

Reaction RXN-16133

  • direction:
    • REVERSIBLE
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links