Difference between revisions of "HOLOCYTOCHROME-C-SYNTHASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CTP CTP] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(N)=...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CTP CTP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(N)=NC(=O)2))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PCDQPRRSZKQHHS-XVFCMESISA-J
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* common name:
 
* common name:
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** CTP
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** Lysyl-tRNA Synthetase
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* molecular weight:
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** Lysyl-tRNA ligase
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** 479.127   
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* ec number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.6 EC-6.1.1.6]
 
* Synonym(s):
 
* Synonym(s):
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** cytidine-triphosphate
 
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** cytidine-5'-triphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.7.7.15-RXN]]
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* With identifiers:
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* [[2.7.7.14-RXN]]
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** 1 [[LYS]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LYS-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-LYS-tRNAs]][c] '''+''' 1 [[AMP]][c]
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* [[RXN0-7080]]
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* With common name(s):
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* [[RXN-12200]]
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** 1 L-lysine[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 a tRNAlys[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-lysyl-[tRNAlys][c] '''+''' 1 AMP[c]
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* [[RXN0-5515]]
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* [[RXN0-723]]
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== Genes associated with this reaction  ==
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* [[RXN-12959]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[2.7.7.60-RXN]]
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* Gene: [[Ec-19_000900]]
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* [[RXN-12195]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[DOLICHOL-KINASE-RXN]]
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*** Assignment: EC-NUMBER
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* [[CDPDIGLYSYN-RXN]]
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* Gene: [[Ec-01_005790]]
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== Reaction(s) known to produce the compound ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-14325]]
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*** Assignment: EC-NUMBER
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* [[CTPSYN-RXN]]
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== Pathways  ==
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* [[CDPKIN-RXN]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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== Reaction(s) of unknown directionality ==
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** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 65-47-4
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* LIGAND-RXN:
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* BIGG : 33710
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** [http://www.genome.jp/dbget-bin/www_bget?R03658 R03658]
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058166 7058166]
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** [http://www.uniprot.org/uniprot/P41258 P41258]
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* HMDB : HMDB00082
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** [http://www.uniprot.org/uniprot/P46861 P46861]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P47382 P47382]
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** [http://www.genome.jp/dbget-bin/www_bget?C00063 C00063]
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** [http://www.uniprot.org/uniprot/O57963 O57963]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/O51603 O51603]
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** [http://www.chemspider.com/Chemical-Structure.5414498.html 5414498]
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** [http://www.uniprot.org/uniprot/Q9JTT7 Q9JTT7]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O83650 O83650]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=37563 37563]
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** [http://www.uniprot.org/uniprot/Q9X231 Q9X231]
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* METABOLIGHTS : MTBLC37563
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** [http://www.uniprot.org/uniprot/P43825 P43825]
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{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N2(C=CC(N)=NC(=O)2))}}
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** [http://www.uniprot.org/uniprot/Q9ZDF8 Q9ZDF8]
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{{#set: inchi key=InChIKey=PCDQPRRSZKQHHS-XVFCMESISA-J}}
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** [http://www.uniprot.org/uniprot/O84786 O84786]
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{{#set: common name=CTP}}
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** [http://www.uniprot.org/uniprot/Q9Z6X5 Q9Z6X5]
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{{#set: molecular weight=479.127    }}
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** [http://www.uniprot.org/uniprot/Q9CII7 Q9CII7]
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{{#set: common name=cytidine-triphosphate|cytidine-5'-triphosphate}}
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** [http://www.uniprot.org/uniprot/P56126 P56126]
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{{#set: consumed by=2.7.7.15-RXN|2.7.7.14-RXN|RXN0-7080|RXN-12200|RXN0-5515|RXN0-723|RXN-12959|2.7.7.60-RXN|RXN-12195|DOLICHOL-KINASE-RXN|CDPDIGLYSYN-RXN}}
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** [http://www.uniprot.org/uniprot/Q9ZMP8 Q9ZMP8]
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{{#set: produced by=RXN-14325|CTPSYN-RXN|CDPKIN-RXN}}
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** [http://www.uniprot.org/uniprot/O67258 O67258]
 +
** [http://www.uniprot.org/uniprot/O84002 O84002]
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** [http://www.uniprot.org/uniprot/Q9RHV9 Q9RHV9]
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** [http://www.uniprot.org/uniprot/P32048 P32048]
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** [http://www.uniprot.org/uniprot/P37879 P37879]
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** [http://www.uniprot.org/uniprot/Q48986 Q48986]
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** [http://www.uniprot.org/uniprot/P0A8N7 P0A8N7]
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** [http://www.uniprot.org/uniprot/P37477 P37477]
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** [http://www.uniprot.org/uniprot/P75500 P75500]
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** [http://www.uniprot.org/uniprot/P95970 P95970]
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** [http://www.uniprot.org/uniprot/P73443 P73443]
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** [http://www.uniprot.org/uniprot/P15180 P15180]
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** [http://www.uniprot.org/uniprot/P0A8N3 P0A8N3]
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** [http://www.uniprot.org/uniprot/P0A8N5 P0A8N5]
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** [http://www.uniprot.org/uniprot/Q43776 Q43776]
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** [http://www.uniprot.org/uniprot/O74059 O74059]
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** [http://www.uniprot.org/uniprot/O30522 O30522]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Lysyl-tRNA Synthetase}}
 +
{{#set: common name=Lysyl-tRNA ligase}}
 +
{{#set: ec number=EC-6.1.1.6}}
 +
{{#set: gene associated=Ec-19_000900|Ec-01_005790}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:13, 21 March 2018

Reaction LYSINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Lysyl-tRNA Synthetase
    • Lysyl-tRNA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-lysine[c] + 1 ATP[c] + 1 H+[c] + 1 a tRNAlys[c] => 1 diphosphate[c] + 1 an L-lysyl-[tRNAlys][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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