Difference between revisions of "Ec-18 001350"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3661 RXN-3661] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DGDP DGDP] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=2...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3661 RXN-3661] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DGDP DGDP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/1.14.12.23 EC-1.14.12.23]
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** InChIKey=CIKGWCTVFSRMJU-KVQBGUIXSA-K
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* common name:
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** dGDP
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* molecular weight:
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** 424.18   
 
* Synonym(s):
 
* Synonym(s):
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** 2'-deoxyguanosine-5'-diphosphate
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** deoxyguanosine-diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[DGDPKIN-RXN]]
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** 1 [[NADH]][c] '''+''' 1 [[BENZENE-NO2]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[NITRITE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CATECHOL]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN0-748]]
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** 1 NADH[c] '''+''' 1 nitrobenzene[c] '''+''' 1 oxygen[c] '''=>''' 1 nitrite[c] '''+''' 1 NAD+[c] '''+''' 1 catechol[c]
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* [[RXN-14217]]
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* [[GDPREDUCT-RXN]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14207]]
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* [[Ec-24_002140]]
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* [[RXN-14218]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-00_005850]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-10_006240]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-24_002150]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-00_005820]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-07_007260]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5640]], nitrobenzene degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5640 PWY-5640]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* CAS : 102783-74-4
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** [http://www.genome.jp/dbget-bin/www_bget?R07706 R07706]
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* BIGG : 34741
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: ec number=EC-1.14.12.23}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245673 25245673]
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{{#set: gene associated=Ec-24_002140|Ec-00_005850|Ec-10_006240|Ec-24_002150|Ec-00_005820|Ec-07_007260}}
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* HMDB : HMDB00960
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{{#set: in pathway=PWY-5640}}
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* LIGAND-CPD:
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{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00361 C00361]
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{{#set: reconstruction source=orthology-aragem}}
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* CHEBI:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58595 58595]
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* METABOLIGHTS : MTBLC58595
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{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))}}
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{{#set: inchi key=InChIKey=CIKGWCTVFSRMJU-KVQBGUIXSA-K}}
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{{#set: common name=dGDP}}
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{{#set: molecular weight=424.18    }}
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{{#set: common name=2'-deoxyguanosine-5'-diphosphate|deoxyguanosine-diphosphate}}
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{{#set: consumed by=DGDPKIN-RXN}}
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{{#set: produced by=RXN0-748|RXN-14217|GDPREDUCT-RXN}}
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{{#set: reversible reaction associated=RXN-14207|RXN-14218}}

Revision as of 14:13, 21 March 2018

Metabolite DGDP

  • smiles:
    • C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
  • inchi key:
    • InChIKey=CIKGWCTVFSRMJU-KVQBGUIXSA-K
  • common name:
    • dGDP
  • molecular weight:
    • 424.18
  • Synonym(s):
    • 2'-deoxyguanosine-5'-diphosphate
    • deoxyguanosine-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 102783-74-4
  • BIGG : 34741
  • PUBCHEM:
  • HMDB : HMDB00960
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC58595
"C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(CC(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))" cannot be used as a page name in this wiki.




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