Difference between revisions of "PWY-6316"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMIDPHOSDEHYD-RXN IMIDPHOSDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** HAD hydrola...")
(Created page with "Category:Gene == Gene Ec-20_000890 == * left end position: ** 832807 * transcription direction: ** NEGATIVE * right end position: ** 848762 * centisome position: ** 16.150...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMIDPHOSDEHYD-RXN IMIDPHOSDEHYD-RXN] ==
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== Gene Ec-20_000890 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 832807
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* common name:
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* transcription direction:
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** HAD hydrolase, subfamily IA
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.19 EC-4.2.1.19]
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** 848762
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* centisome position:
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** 16.150873   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0195_0017
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** Esi0195_0017
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** ALARS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ALANINE--TRNA-LIGASE-RXN]]
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** 1 [[D-ERYTHRO-IMIDAZOLE-GLYCEROL-P]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[IMIDAZOLE-ACETOL-P]][c]
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* With common name(s):
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** 1 D-erythro-imidazole-glycerol-phosphate[c] '''=>''' 1 H2O[c] '''+''' 1 imidazole acetol-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_005110]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=832807}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11040 11040]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=848762}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03457 R03457]
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{{#set: centisome position=16.150873    }}
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* UNIPROT:
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{{#set: common name=Esi_0195_0017|Esi0195_0017|ALARS}}
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** [http://www.uniprot.org/uniprot/Q58109 Q58109]
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{{#set: reaction associated=ALANINE--TRNA-LIGASE-RXN}}
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** [http://www.uniprot.org/uniprot/P06633 P06633]
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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** [http://www.uniprot.org/uniprot/P10368 P10368]
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** [http://www.uniprot.org/uniprot/P06987 P06987]
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** [http://www.uniprot.org/uniprot/Q9PM76 Q9PM76]
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** [http://www.uniprot.org/uniprot/P44327 P44327]
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** [http://www.uniprot.org/uniprot/Q02134 Q02134]
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** [http://www.uniprot.org/uniprot/P64371 P64371]
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** [http://www.uniprot.org/uniprot/Q12578 Q12578]
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** [http://www.uniprot.org/uniprot/P18787 P18787]
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** [http://www.uniprot.org/uniprot/P16247 P16247]
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** [http://www.uniprot.org/uniprot/P28624 P28624]
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** [http://www.uniprot.org/uniprot/P34041 P34041]
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** [http://www.uniprot.org/uniprot/Q02986 Q02986]
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** [http://www.uniprot.org/uniprot/P40374 P40374]
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** [http://www.uniprot.org/uniprot/P48054 P48054]
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** [http://www.uniprot.org/uniprot/Q43072 Q43072]
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** [http://www.uniprot.org/uniprot/Q9X7B9 Q9X7B9]
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** [http://www.uniprot.org/uniprot/O48932 O48932]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=HAD hydrolase, subfamily IA}}
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{{#set: ec number=EC-4.2.1.19}}
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{{#set: gene associated=Ec-01_005110}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:13, 21 March 2018

Gene Ec-20_000890

  • left end position:
    • 832807
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 848762
  • centisome position:
    • 16.150873
  • Synonym(s):
    • Esi_0195_0017
    • Esi0195_0017
    • ALARS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6316&oldid=16757"