Difference between revisions of "Ec-14 005330"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-BUTYRYL-COA 2-METHYL-BUTYRYL-COA] == * smiles: ** CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidylinositol-...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-METHYL-BUTYRYL-COA 2-METHYL-BUTYRYL-COA] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.68-RXN 2.7.1.68-RXN] ==
−
* smiles:
+
* direction:
−
** CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=LYNVNYDEQMMNMZ-XGXNYEOVSA-J
+
 
* common name:
 
* common name:
−
** 2-methylbutanoyl-CoA
+
** Phosphatidylinositol-4-phosphate 5-kinase, core
−
* molecular weight:
+
** phosphatidylinositol-4-phosphate 5-kinase its3
−
** 847.62   
+
** Phosphatidylinositol-4-phosphate 5-kinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.68 EC-2.7.1.68]
 
* Synonym(s):
 
* Synonym(s):
−
** S-2-methyl-butyryl-CoA
 
−
** 2-methylbutyryl-CoA
 
−
** α-methylbutyryl-CoA
 
−
** α-methylbutanoyl-CoA
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1 [[ATP]][c] '''+''' 1 [[CPD-1108]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c]
−
* [[MBCOA-DHLIPOAMIDE-RXN]]
+
* With common name(s):
−
* [[2KETO-3METHYLVALERATE-RXN]]
+
** 1 ATP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c]
−
* [[2-METHYLACYL-COA-DEHYDROGENASE-RXN]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-05_001250]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-04_001040]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000710]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-02_002790]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-13_001240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-6352]], 3-phosphoinositide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266569 45266569]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14425 14425]
−
* CHEBI:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57336 57336]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03469 R03469]
−
* LIGAND-CPD:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?C01033 C01033]
+
** [http://www.uniprot.org/uniprot/P48426 P48426]
−
* HMDB : HMDB01041
+
** [http://www.uniprot.org/uniprot/Q56YP2 Q56YP2]
−
{{#set: smiles=CCC(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: inchi key=InChIKey=LYNVNYDEQMMNMZ-XGXNYEOVSA-J}}
+
{{#set: common name=Phosphatidylinositol-4-phosphate 5-kinase, core}}
−
{{#set: common name=2-methylbutanoyl-CoA}}
+
{{#set: common name=phosphatidylinositol-4-phosphate 5-kinase its3}}
−
{{#set: molecular weight=847.62    }}
+
{{#set: common name=Phosphatidylinositol-4-phosphate 5-kinase}}
−
{{#set: common name=S-2-methyl-butyryl-CoA|2-methylbutyryl-CoA|α-methylbutyryl-CoA|α-methylbutanoyl-CoA}}
+
{{#set: ec number=EC-2.7.1.68}}
−
{{#set: reversible reaction associated=MBCOA-DHLIPOAMIDE-RXN|2KETO-3METHYLVALERATE-RXN|2-METHYLACYL-COA-DEHYDROGENASE-RXN}}
+
{{#set: gene associated=Ec-05_001250|Ec-04_001040|Ec-19_000710|Ec-02_002790|Ec-13_001240}}
 +
{{#set: in pathway=PWY-6352|PWY-6351}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:13, 21 March 2018

Reaction 2.7.1.68-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphatidylinositol-4-phosphate 5-kinase, core
    • phosphatidylinositol-4-phosphate 5-kinase its3
    • Phosphatidylinositol-4-phosphate 5-kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6352, 3-phosphoinositide biosynthesis: PWY-6352
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis: PWY-6351
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_005330&oldid=16793"