Difference between revisions of "Ec-28 003190"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** uroporphyrino...")
(Created page with "Category:Gene == Gene Ec-10_001570 == * left end position: ** 1607200 * transcription direction: ** POSITIVE * right end position: ** 1615865 * centisome position: ** 24.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
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== Gene Ec-10_001570 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1607200
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* common name:
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* transcription direction:
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** uroporphyrinogen synthase, putative chloroplast precursor
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.75 EC-4.2.1.75]
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** 1615865
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* centisome position:
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** 24.722408   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0073_0140
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** Esi0073_0140
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.4.25.1-RXN]]
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** 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
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* With common name(s):
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** 1 preuroporphyrinogen[c] '''=>''' 1 uroporphyrinogen-III[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_004890]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1607200}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1615865}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
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{{#set: centisome position=24.722408    }}
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* UNIPROT:
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{{#set: common name=Esi_0073_0140|Esi0073_0140}}
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** [http://www.uniprot.org/uniprot/P10746 P10746]
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{{#set: reaction associated=3.4.25.1-RXN}}
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** [http://www.uniprot.org/uniprot/P51163 P51163]
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** [http://www.uniprot.org/uniprot/P21248 P21248]
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** [http://www.uniprot.org/uniprot/Q58401 Q58401]
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** [http://www.uniprot.org/uniprot/P09126 P09126]
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** [http://www.uniprot.org/uniprot/Q59294 Q59294]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=uroporphyrinogen synthase, putative chloroplast precursor}}
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{{#set: ec number=EC-4.2.1.75}}
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{{#set: gene associated=Ec-12_004890}}
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{{#set: in pathway=PWY-5189|PWY-5188}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:14, 21 March 2018

Gene Ec-10_001570

  • left end position:
    • 1607200
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1615865
  • centisome position:
    • 24.722408
  • Synonym(s):
    • Esi_0073_0140
    • Esi0073_0140

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-28_003190&oldid=16849"