Difference between revisions of "Ec-01 005840"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5740 PWY-5740] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** monodehydroascorbate re...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5740 PWY-5740] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** GDP-L-colitose biosynthesis
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** monodehydroascorbate reductase (NADH)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.6.5.4 EC-1.6.5.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[GDPMANDEHYDRA-RXN]]
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** 1 [[NADH]][c] '''+''' 2 [[CPD-318]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[ASCORBATE]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-11_005510]]
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** 1 NADH[c] '''+''' 2 monodehydroascorbate radical[c] '''=>''' 1 NAD+[c] '''+''' 1 H+[c] '''+''' 2 L-ascorbate[c]
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*** [[Ec-28_003400]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* Gene: [[Ec-26_002470]]
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== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15217 RXN-15217]
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*** Assignment: GO-TERM
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15218 RXN-15218]
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8954 RXN-8954]
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8955 RXN-8955]
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* Gene: [[Ec-22_003850]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1224}}
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* RHEA:
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{{#set: common name=GDP-L-colitose biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14581 14581]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: total reaction=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00095 R00095]
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{{#set: completion rate=20.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9S926 Q9S926]
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** [http://www.uniprot.org/uniprot/Q40977 Q40977]
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** [http://www.uniprot.org/uniprot/Q42711 Q42711]
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** [http://www.uniprot.org/uniprot/Q43497 Q43497]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=monodehydroascorbate reductase (NADH)}}
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{{#set: ec number=EC-1.6.5.4}}
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{{#set: gene associated=Ec-26_002470|Ec-22_003850}}
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{{#set: in pathway=PWY-6370}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:14, 21 March 2018

Reaction 1.6.5.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • monodehydroascorbate reductase (NADH)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADH[c] + 2 monodehydroascorbate radical[c] => 1 NAD+[c] + 1 H+[c] + 2 L-ascorbate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6370, ascorbate recycling (cytosolic): PWY-6370
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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