Difference between revisions of "Ec-14 004260"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Gene == Gene Ec-21_003730 == * left end position: ** 4720892 * transcription direction: ** NEGATIVE * right end position: ** 4732679 * centisome position: ** 63.9...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] ==
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== Gene Ec-21_003730 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** 4720892
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* common name:
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* transcription direction:
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** TCA cycle VII (acetate-producers)
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** NEGATIVE
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* right end position:
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** 4732679
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* centisome position:
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** 63.967693   
 
* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
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** Esi_0072_0109
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** citric acid cycle
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** Esi0072_0109
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** Krebs cycle
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** OAT
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** Szent-Gyorgyi-Krebs cycle
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== Reaction(s) found ==
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== Reactions associated ==
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'''7''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
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* [[2OXOGLUTARATEDEH-RXN]]
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** Source: [[orthology-aragem]]
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** 3 associated gene(s):
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* Reaction: [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
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*** [[Ec-21_002300]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-27_004160]]
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*** Assignment: ec-number
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*** [[Ec-25_000020]]
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* Reaction: [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* [[ACONITATEDEHYDR-RXN]]
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== Pathways associated ==
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** 2 associated gene(s):
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* [[ARGASEDEG-PWY]]
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*** [[Ec-16_001000]]
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* [[PWY-6922]]
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*** [[Ec-12_000170]]
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* [[PWY-6344]]
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** 1 reconstruction source(s) associated:
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* [[PWY-3341]]
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*** [[annotation-esiliculosus_genome]]
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* [[ARG-PRO-PWY]]
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* [[ACONITATEHYDR-RXN]]
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* [[PWY-4981]]
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** 2 associated gene(s):
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* [[GLYSYN-ALA-PWY]]
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*** [[Ec-12_000170]]
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* [[ARGININE-SYN4-PWY]]
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*** [[Ec-16_001000]]
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* [[CITRULBIO-PWY]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[CITSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-23_003460]]
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*** [[Ec-25_001360]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ISOCITDEH-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_003080]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-14971]]
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** 6 associated gene(s):
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*** [[Ec-07_007310]]
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*** [[Ec-27_006560]]
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*** [[Ec-07_002870]]
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*** [[Ec-11_000360]]
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*** [[Ec-05_003640]]
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*** [[Ec-21_003470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8807 RXN-8807]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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{{#set: left end position=4720892}}
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{{#set: common name=TCA cycle VII (acetate-producers)}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
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{{#set: right end position=4732679}}
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{{#set: reaction found=7}}
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{{#set: centisome position=63.967693    }}
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{{#set: total reaction=9}}
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{{#set: common name=Esi_0072_0109|Esi0072_0109|OAT}}
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{{#set: completion rate=78.0}}
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{{#set: reaction associated=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN|ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN|ORNITHINE-GLU-AMINOTRANSFERASE-RXN}}
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{{#set: pathway associated=ARGASEDEG-PWY|PWY-6922|PWY-6344|PWY-3341|ARG-PRO-PWY|PWY-4981|GLYSYN-ALA-PWY|ARGININE-SYN4-PWY|CITRULBIO-PWY}}

Revision as of 14:15, 21 March 2018

Gene Ec-21_003730

  • left end position:
    • 4720892
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4732679
  • centisome position:
    • 63.967693
  • Synonym(s):
    • Esi_0072_0109
    • Esi0072_0109
    • OAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_004260&oldid=16956"