Difference between revisions of "Ec-22 002520"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** uroporphyrino...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** Methanobacterium thermoautotrophicum biosynthetic metabolism
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** uroporphyrinogen synthase, putative chloroplast precursor
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.75 EC-4.2.1.75]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''9''' reactions found over '''16''' reactions in the full pathway
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* With identifiers:
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* [[ALANINE-SYN2-PWY]]
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** 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c]
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** 0 associated gene:
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* With common name(s):
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* [[ASPARTATESYN-PWY]]
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** 1 preuroporphyrinogen[c] '''=>''' 1 H2O[c] '''+''' 1 uroporphyrinogen-III[c]
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** 0 associated gene:
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* [[CODH-PWY]]
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== Genes associated with this reaction  ==
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** 0 associated gene:
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Genes have been associated with this reaction based on different elements listed below.
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* [[P42-PWY]]
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* Gene: [[Ec-12_004890]]
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** 0 associated gene:
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** Source: [[annotation-esiliculosus_genome]]
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* [[PEPCARBOX-RXN]]
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*** Assignment: EC-NUMBER
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** 1 associated gene(s):
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== Pathways  ==
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*** [[Ec-28_003470]]
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* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
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** 1 reconstruction source(s) associated:
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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* [[PWY-5910]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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** 0 associated gene:
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== Reconstruction information  ==
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* [[PWY-6141]]
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* Category: [[annotation]]
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** 0 associated gene:
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6142]]
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*** Tool: [[pathwaytools]]
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** 0 associated gene:
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-03_001890]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2157}}
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* RHEA:
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{{#set: common name=Methanobacterium thermoautotrophicum biosynthetic metabolism}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
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{{#set: reaction found=9}}
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* LIGAND-RXN:
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{{#set: total reaction=16}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
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{{#set: completion rate=56.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P10746 P10746]
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** [http://www.uniprot.org/uniprot/P51163 P51163]
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** [http://www.uniprot.org/uniprot/P21248 P21248]
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** [http://www.uniprot.org/uniprot/Q58401 Q58401]
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** [http://www.uniprot.org/uniprot/P09126 P09126]
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** [http://www.uniprot.org/uniprot/Q59294 Q59294]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=uroporphyrinogen synthase, putative chloroplast precursor}}
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{{#set: ec number=EC-4.2.1.75}}
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{{#set: gene associated=Ec-12_004890}}
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{{#set: in pathway=PWY-5189|PWY-5188}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:15, 21 March 2018

Reaction UROGENIIISYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • uroporphyrinogen synthase, putative chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5189, tetrapyrrole biosynthesis II (from glycine): PWY-5189
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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