Difference between revisions of "GLUCOSAMINEPNACETYLTRANS-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogluconate dehydrog...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12490 RXN-12490] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** cyanate degradation
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** 6-phosphogluconate dehydrogenase, C-terminal-like
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** 3-hydroxyacyl-CoA dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
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** cyanate catabolism
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RXN0-5222]]
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** 1 [[NAD]][c] '''+''' 1 [[CPD0-2244]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD0-2123]][c] '''+''' 1 [[NADH]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 NAD+[c] '''+''' 1 (S)-3-hydroxydecanoyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 3-oxodecanoyl-CoA[c] '''+''' 1 NADH[c]
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*** [[annotation-esiliculosus_genome]]
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* [[RXN0-5224]]
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== Genes associated with this reaction  ==
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** 8 associated gene(s):
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-05_001290]]
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* Gene: [[Ec-19_005290]]
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*** [[Ec-10_002770]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-27_005680]]
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*** Assignment: EC-NUMBER
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*** [[Ec-07_004610]]
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* Gene: [[Ec-14_006530]]
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*** [[Ec-16_004700]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-22_001150]]
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*** Assignment: GO-TERM
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*** [[Ec-06_004120]]
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** Source: [[orthology-aragem]]
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*** [[Ec-03_001960]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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*** [[annotation-esiliculosus_genome]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reaction(s) not found ==
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN]
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31188 31188]
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* PLANTCYC : CYANCAT-PWY
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R04743 R04743]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=6-phosphogluconate dehydrogenase, C-terminal-like}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=3-hydroxyacyl-CoA dehydrogenase}}
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{{#set: common name=cyanate degradation}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: common name=cyanate catabolism}}
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{{#set: gene associated=Ec-19_005290|Ec-14_006530}}
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{{#set: reaction found=2}}
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{{#set: in pathway=PWY-7094}}
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{{#set: total reaction=3}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:16, 21 March 2018

Reaction RXN-12490

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-phosphogluconate dehydrogenase, C-terminal-like
    • 3-hydroxyacyl-CoA dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 (S)-3-hydroxydecanoyl-CoA[c] => 1 H+[c] + 1 3-oxodecanoyl-CoA[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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