Difference between revisions of "1-3-beta-D-Glucans"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-REDUCT-RXN GMP-REDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** IMP dehydrogenase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-REDUCT-RXN GMP-REDUCT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** IMP dehydrogenase/GMP reductase
+
** 2,3,4-saturated fatty acyl-CoA synthetase
 +
** long chain acyl-coA synthetase
 +
** long chain acyl-CoA synthetase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.7.1.7 EC-1.7.1.7]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
 +
** Acyl-activating enzyme
 +
** Fatty acid thiokinase (long-chain)
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[IMP]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[CPD66-39]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 GMP[c] '''+''' 2 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 ammonium[c] '''+''' 1 NADP+[c] '''+''' 1 IMP[c]
+
** 1 coenzyme A[c] '''+''' 1 a 2,3,4-saturated fatty acid[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-19_000030]]
+
* Gene: [[Ec-03_003710]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-01_001560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_008720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_006430]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 26: Line 47:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17185 17185]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01134 R01134]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9ZKZ2 Q9ZKZ2]
+
** [http://www.uniprot.org/uniprot/P18163 P18163]
−
** [http://www.uniprot.org/uniprot/Q9CGF1 Q9CGF1]
+
** [http://www.uniprot.org/uniprot/P39518 P39518]
−
** [http://www.uniprot.org/uniprot/P36959 P36959]
+
** [http://www.uniprot.org/uniprot/O51162 O51162]
−
** [http://www.uniprot.org/uniprot/O05269 O05269]
+
** [http://www.uniprot.org/uniprot/P39002 P39002]
−
** [http://www.uniprot.org/uniprot/O25525 O25525]
+
** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
−
** [http://www.uniprot.org/uniprot/P60560 P60560]
+
** [http://www.uniprot.org/uniprot/Q10776 Q10776]
−
** [http://www.uniprot.org/uniprot/O16294 O16294]
+
** [http://www.uniprot.org/uniprot/O83181 O83181]
 +
** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
 +
** [http://www.uniprot.org/uniprot/P94547 P94547]
 +
** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
 +
** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
 +
** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
 +
** [http://www.uniprot.org/uniprot/P44446 P44446]
 +
** [http://www.uniprot.org/uniprot/O30039 O30039]
 +
** [http://www.uniprot.org/uniprot/O51539 O51539]
 +
** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
 +
** [http://www.uniprot.org/uniprot/P33121 P33121]
 +
** [http://www.uniprot.org/uniprot/P33124 P33124]
 +
** [http://www.uniprot.org/uniprot/P30624 P30624]
 +
** [http://www.uniprot.org/uniprot/Q02602 Q02602]
 +
** [http://www.uniprot.org/uniprot/P69451 P69451]
 +
** [http://www.uniprot.org/uniprot/P69452 P69452]
 +
** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
 +
** [http://www.uniprot.org/uniprot/P47912 P47912]
 +
** [http://www.uniprot.org/uniprot/P73004 P73004]
 +
** [http://www.uniprot.org/uniprot/O81614 O81614]
 +
** [http://www.uniprot.org/uniprot/O15840 O15840]
 +
** [http://www.uniprot.org/uniprot/Q96537 Q96537]
 +
** [http://www.uniprot.org/uniprot/Q96538 Q96538]
 +
** [http://www.uniprot.org/uniprot/Q96338 Q96338]
 +
** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
 +
** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
 +
** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
 +
** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
 +
** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
 +
** [http://www.uniprot.org/uniprot/O60135 O60135]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=IMP dehydrogenase/GMP reductase}}
+
{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
−
{{#set: ec number=EC-1.7.1.7}}
+
{{#set: common name=long chain acyl-coA synthetase}}
−
{{#set: gene associated=Ec-19_000030}}
+
{{#set: common name=long chain acyl-CoA synthetase}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-6.2.1.3}}
 +
{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
 +
{{#set: gene associated=Ec-03_003710|Ec-01_001560|Ec-12_008720|Ec-02_006430}}
 +
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:16, 21 March 2018

Reaction ACYLCOASYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3,4-saturated fatty acyl-CoA synthetase
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):
    • Acyl-activating enzyme
    • Fatty acid thiokinase (long-chain)

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 a 2,3,4-saturated fatty acid[c] + 1 ATP[c] => 1 diphosphate[c] + 1 AMP[c] + 1 a 2,3,4-saturated fatty acyl CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 2 reactions found over 5 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






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