Difference between revisions of "RXN-13202"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRO-DIOH-BENZOATE DIHYDRO-DIOH-BENZOATE] == * smiles: ** C([O-])(=O)C1(=CC=CC(C1O)O) * inch...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-3-PHOSPHATE-CYCLASE-RXN RNA-3-PHOSPHATE-CYCLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRO-DIOH-BENZOATE DIHYDRO-DIOH-BENZOATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RNA-3-PHOSPHATE-CYCLASE-RXN RNA-3-PHOSPHATE-CYCLASE-RXN] ==
* smiles:
+
* direction:
** C([O-])(=O)C1(=CC=CC(C1O)O)
+
** LEFT-TO-RIGHT
* inchi key:
+
** InChIKey=INCSWYKICIYAHB-WDSKDSINSA-M
+
 
* common name:
 
* common name:
** (2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
+
** RNA 3'-terminal phosphate cyclase domain
* molecular weight:
+
* ec number:
** 155.13   
+
** [http://enzyme.expasy.org/EC/6.5.1.4 EC-6.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[DHBDEHYD-RXN]]
+
* With identifiers:
== Reaction(s) known to produce the compound ==
+
** 1 [[3-Prime-Phosphate-Terminated-RNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Cyclic-Phosphate-Terminated-RNAs]][c]
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 an RNA 3'-terminal-phosphate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an RNA terminal-2',3'-cyclic-phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-10_001150]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* PUBCHEM:
+
* LIGAND-RXN:
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266758 45266758]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04274 R04274]
* CHEMSPIDER:
+
* UNIPROT:
** [http://www.chemspider.com/Chemical-Structure.19951064.html 19951064]
+
** [http://www.uniprot.org/uniprot/Q9V0Z6 Q9V0Z6]
* CHEBI:
+
** [http://www.uniprot.org/uniprot/O00442 O00442]
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58764 58764]
+
{{#set: direction=LEFT-TO-RIGHT}}
* BIGG : 43290
+
{{#set: common name=RNA 3'-terminal phosphate cyclase domain}}
* LIGAND-CPD:
+
{{#set: ec number=EC-6.5.1.4}}
** [http://www.genome.jp/dbget-bin/www_bget?C04171 C04171]
+
{{#set: gene associated=Ec-10_001150}}
{{#set: smiles=C([O-])(=O)C1(=CC=CC(C1O)O)}}
+
{{#set: in pathway=}}
{{#set: inchi key=InChIKey=INCSWYKICIYAHB-WDSKDSINSA-M}}
+
{{#set: reconstruction category=annotation}}
{{#set: common name=(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: molecular weight=155.13    }}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: consumed by=DHBDEHYD-RXN}}
+

Revision as of 14:18, 21 March 2018

Reaction RNA-3-PHOSPHATE-CYCLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • RNA 3'-terminal phosphate cyclase domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links