Difference between revisions of "Ec-10 001310"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-containing-5Me-uridine54 tRNA-containing-5Me-uridine54] == * common name: ** a 5-methylura...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranylgeranyl reductase * Sy...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-containing-5Me-uridine54 tRNA-containing-5Me-uridine54] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a 5-methyluracil54 in tRNA
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** Geranylgeranyl reductase
 
* Synonym(s):
 
* Synonym(s):
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** a tRNA containing 5-methyluracil54
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[TRNA-URACIL-5--METHYLTRANSFERASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-7003]][c] '''=>''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[NADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 tetrahydrogeranylgeranyl diphosphate[c] '''=>''' 1 phytyl diphosphate[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-03_003520]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a 5-methyluracil54 in tRNA}}
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* LIGAND-RXN:
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{{#set: common name=a tRNA containing 5-methyluracil54}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756]
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{{#set: produced by=TRNA-URACIL-5--METHYLTRANSFERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Geranylgeranyl reductase}}
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{{#set: gene associated=Ec-03_003520}}
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{{#set: in pathway=PWY-5063}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:19, 21 March 2018

Reaction RXN-7660

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Geranylgeranyl reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADPH[c] + 1 tetrahydrogeranylgeranyl diphosphate[c] => 1 phytyl diphosphate[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_001310&oldid=17560"