Difference between revisions of "ENTNER-DOUDOROFF-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthet...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** glycine betaine biosynthesis III (plants)
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** long chain acyl-coA synthetase
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** long chain acyl-CoA synthetase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** glycine betaine biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[BADH-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[CPD-9247]][e] '''+''' 1 [[PROTON]][e] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-18346]][c] '''+''' 1 [[AMP]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-20_003790]]
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** 1 ATP[c] '''+''' 1 cis-vaccenate[e] '''+''' 1 H+[e] '''+''' 1 coenzyme A[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 cis-vaccenoyl-CoA[c] '''+''' 1 AMP[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* [[RXN-6268]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* Gene: [[Ec-01_001560]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Reaction(s) not found ==
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* Gene: [[Ec-12_008720]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-357 RXN1F-357]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: common name=glycine betaine biosynthesis III (plants)}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=glycine betaine biosynthesis}}
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{{#set: gene associated=Ec-01_001560|Ec-12_008720|Ec-02_006430|Ec-03_003710}}
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{{#set: reaction found=2}}
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{{#set: in pathway=}}
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{{#set: total reaction=3}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:19, 21 March 2018

Reaction RXN0-7238

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 cis-vaccenate[e] + 1 H+[e] + 1 coenzyme A[c] => 1 H+[c] + 1 diphosphate[c] + 1 cis-vaccenoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ENTNER-DOUDOROFF-PWY&oldid=17646"