Difference between revisions of "R223-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13883 RXN-13883] == * direction: ** LEFT-TO-RIGHT * common name: ** Fatty acid hydroxylase * ec...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13883 RXN-13883] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** sucrose biosynthesis II
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** Fatty acid hydroxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.19.20 EC-1.14.19.20]
 
* Synonym(s):
 
* Synonym(s):
** sucrose biosynthesis II (from starch degradation intermediates)
 
** sucrose biosynthesis II (plant cytosol)
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''4''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
* [[GLUC1PURIDYLTRANS-RXN]]
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** 2 [[FERROCYTOCHROME-B5]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-14893]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[FERRICYTOCHROME-B5]][c] '''+''' 1 [[CPD-14894]][c] '''+''' 2 [[WATER]][c]
** 4 associated gene(s):
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* With common name(s):
*** [[Ec-05_002180]]
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** 2 a ferrocytochrome b5[c] '''+''' 1 oxygen[c] '''+''' 1 ergost-7-enol[c] '''+''' 2 H+[c] '''=>''' 2 a ferricytochrome b5[c] '''+''' 1 ergosta-5,7-dienol[c] '''+''' 2 H2O[c]
*** [[Ec-12_002300]]
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*** [[Ec-03_002030]]
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== Genes associated with this reaction  ==
*** [[Ec-16_004100]]
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Genes have been associated with this reaction based on different elements listed below.
** 2 reconstruction source(s) associated:
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* Gene: [[Ec-01_003780]]
*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
*** [[orthology-aragem]]
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*** Assignment: EC-NUMBER
* [[GLUCOKIN-RXN]]
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== Pathways  ==
** 1 associated gene(s):
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* [[PWY-7154]], ergosterol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7154 PWY-7154]
*** [[Ec-27_005030]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
* [[PGLUCISOM-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
** 3 associated gene(s):
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*** Tool: [[pathwaytools]]
*** [[Ec-24_002470]]
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*** [[Ec-13_003530]]
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*** [[Ec-13_003810]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PHOSPHOGLUCMUT-RXN]]
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** 1 associated gene(s):
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*** [[Ec-17_001480]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14353 RXN-14353]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14354 RXN-14354]
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* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATE-SYNTHASE-RXN SUCROSE-PHOSPHATE-SYNTHASE-RXN]
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== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=sucrose biosynthesis II}}
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{{#set: common name=Fatty acid hydroxylase}}
{{#set: common name=sucrose biosynthesis II (from starch degradation intermediates)|sucrose biosynthesis II (plant cytosol)}}
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{{#set: ec number=EC-1.14.19.20}}
{{#set: reaction found=4}}
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{{#set: gene associated=Ec-01_003780}}
{{#set: total reaction=8}}
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{{#set: in pathway=PWY-7154}}
{{#set: completion rate=50.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:21, 21 March 2018

Reaction RXN-13883

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Fatty acid hydroxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7154, ergosterol biosynthesis II: PWY-7154
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links