Difference between revisions of "PORPHOBILINOGEN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxy-3-methylbut-2-eny...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7766 PWY-7766] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7766 PWY-7766] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
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** 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
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** heme biosynthesis IV (Gram-positive bacteria)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''4''' reactions in the full pathway
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** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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* [[UROGENDECARBOX-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 1 isopentenyl diphosphate[c] '''+''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
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*** [[Ec-24_000620]]
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*** [[Ec-01_000360]]
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== Genes associated with this reaction  ==
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*** [[Ec-24_000650]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Ec-06_002680]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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== Reaction(s) not found ==
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17517 RXN-17517]
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** [[pantograph]]-[[aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17518 RXN-17518]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17519 RXN-17519]
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-1239}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08209 R08209]
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{{#set: taxonomic range=TAX-201174}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05884 R05884]
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{{#set: common name=heme biosynthesis IV (Gram-positive bacteria)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=1}}
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{{#set: common name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase}}
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{{#set: total reaction=4}}
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{{#set: ec number=EC-1.17.7.4}}
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{{#set: completion rate=25.0}}
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{{#set: gene associated=Ec-06_002680}}
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:24, 21 March 2018

Pathway PWY-7766

  • taxonomic range:
  • common name:
    • heme biosynthesis IV (Gram-positive bacteria)
  • Synonym(s):

Reaction(s) found

1 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PORPHOBILINOGEN&oldid=18269"