Difference between revisions of "RXN-9539"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HCO3 HCO3] == * smiles: ** C([O-])(=O)O * inchi key: ** InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxy-3-methylbut-2-eny...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HCO3 HCO3] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] ==
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* smiles:
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* direction:
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** C([O-])(=O)O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M
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* common name:
 
* common name:
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** hydrogen carbonate
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** 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
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* molecular weight:
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* ec number:
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** 61.017   
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** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4]
 
* Synonym(s):
 
* Synonym(s):
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** carbonate
 
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** CO3-2
 
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** CO32-
 
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** HCO3-
 
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** HCO3
 
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** bicarbonate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[PEPCARBOX-RXN]]
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* With identifiers:
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* [[CARBPSYN-RXN]]
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** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c]
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* With common name(s):
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* [[RXN-16909]]
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** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 isopentenyl diphosphate[c]
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* [[RXN-13202]]
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* [[RXN1G-4355]]
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== Genes associated with this reaction  ==
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* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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* Gene: [[Ec-06_002680]]
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== Reaction(s) known to produce the compound ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[1.2.1.27-RXN]]
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*** Assignment: EC-NUMBER
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* [[RXN-11213]]
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** Source: [[orthology-aragem]]
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== Reaction(s) of unknown directionality ==
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== Pathways  ==
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* [[RXN0-5224]]
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-14569]]
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 71-52-3
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* LIGAND-RXN:
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* CAS : 144-55-8
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** [http://www.genome.jp/dbget-bin/www_bget?R08209 R08209]
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* BIGG : 34509
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** [http://www.genome.jp/dbget-bin/www_bget?R05884 R05884]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=769 769]
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{{#set: common name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase}}
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* HMDB : HMDB00595
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{{#set: ec number=EC-1.17.7.4}}
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* LIGAND-CPD:
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{{#set: gene associated=Ec-06_002680}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00288 C00288]
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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* CHEMSPIDER:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.chemspider.com/Chemical-Structure.749.html 749]
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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* CHEBI:
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17544 17544]
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* METABOLIGHTS : MTBLC17544
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{{#set: smiles=C([O-])(=O)O}}
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{{#set: inchi key=InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M}}
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{{#set: common name=hydrogen carbonate}}
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{{#set: molecular weight=61.017    }}
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{{#set: common name=carbonate|CO3-2|CO32-|HCO3-|HCO3|bicarbonate}}
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{{#set: consumed by=PEPCARBOX-RXN|CARBPSYN-RXN|ACETYL-COA-CARBOXYLTRANSFER-RXN|RXN-16909|RXN-13202|RXN1G-4355|METHYLCROTONYL-COA-CARBOXYLASE-RXN|PYRUVATE-CARBOXYLASE-RXN}}
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{{#set: produced by=1.2.1.27-RXN|RXN-11213}}
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{{#set: reversible reaction associated=RXN0-5224|PROPIONYL-COA-CARBOXY-RXN|RXN-14569}}
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Revision as of 13:24, 21 March 2018

Reaction ISPH2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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