Difference between revisions of "Ec-06 001650"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEH-RXN PYRUVDEH-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Ec-11_002480 == * left end position: ** 2611521 * transcription direction: ** NEGATIVE * right end position: ** 2624115 * centisome position: ** 41.5...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEH-RXN PYRUVDEH-RXN] ==
+
== Gene Ec-11_002480 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2611521
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
+
** NEGATIVE
 +
* right end position:
 +
** 2624115
 +
* centisome position:
 +
** 41.520874   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0048_0004
 +
** Esi0048_0004
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[6-PHOSPHOFRUCTO-2-KINASE-RXN]]
−
** 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 coenzyme A[c] '''+''' 1 NAD+[c] '''+''' 1 pyruvate[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 acetyl-CoA[c]
+
== Pathways associated ==
−
 
+
* [[PWY66-423]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-01_010530]]
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-25_000020]]
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-27_000530]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-18_000080]]
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-27_004160]]
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-23_002710]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-25_000140]]
+
−
** [[pantograph]]-[[aragem]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-18_003420]]
+
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways  ==
+
−
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
+
−
** '''7''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
+
−
** '''6''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
+
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5537]], pyruvate fermentation to acetate V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]], superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-TCA-GLYOX-BYPASS GLYCOLYSIS-TCA-GLYOX-BYPASS]
+
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-5482]], pyruvate fermentation to acetate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5482 PWY-5482]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=2611521}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28042 28042]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=2624115}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00209 R00209]
+
{{#set: centisome position=41.520874    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Esi_0048_0004|Esi0048_0004}}
−
{{#set: ec number=EC-1.2.1}}
+
{{#set: reaction associated=6-PHOSPHOFRUCTO-2-KINASE-RXN}}
−
{{#set: gene associated=Ec-01_010530|Ec-25_000020|Ec-27_000530|Ec-18_000080|Ec-27_004160|Ec-23_002710|Ec-25_000140|Ec-18_003420}}
+
{{#set: pathway associated=PWY66-423}}
−
{{#set: in pathway=PWY-7218|PWY-7384|PWY-6886|PWY-5537|GLYCOLYSIS-TCA-GLYOX-BYPASS|PWY-5482}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Revision as of 14:25, 21 March 2018

Gene Ec-11_002480

  • left end position:
    • 2611521
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2624115
  • centisome position:
    • 41.520874
  • Synonym(s):
    • Esi_0048_0004
    • Esi0048_0004

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_001650&oldid=18412"