Difference between revisions of "CPD-6991"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMMONIUM AMMONIUM] == * smiles: ** [NH4+] * inchi key: ** InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16475 RXN-16475] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMMONIUM AMMONIUM] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16475 RXN-16475] ==
* smiles:
+
* direction:
** [NH4+]
+
** REVERSIBLE
* inchi key:
+
** InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O
+
* common name:
+
** ammonium
+
* molecular weight:
+
** 18.038   
+
 
* Synonym(s):
 
* Synonym(s):
** NH4+
 
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[GLUTAMINESYN-RXN]]
+
* With identifiers:
* [[ASNSYNA-RXN]]
+
** 1 [[CPD-13122]][c] '''<=>''' 1 [[CPD-37]][c]
* [[RXN-13202]]
+
* With common name(s):
* [[GMP-SYN-NH3-RXN]]
+
** 1 4-deoxy-L-threo-hex-4-enopyranuronate[c] '''<=>''' 1 5-dehydro-4-deoxy-D-glucuronate[c]
* [[RXN-9615]]
+
 
* [[RXN-16910]]
+
== Genes associated with this reaction  ==
* [[RXN-14325]]
+
== Pathways  ==
* [[NAD-SYNTH-NH3-RXN]]
+
* [[PWY-6507]], 4-deoxy-L-threo-hex-4-enopyranuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6507 PWY-6507]
== Reaction(s) known to produce the compound ==
+
** '''2''' reactions found over '''5''' reactions in the full pathway
* [[HOMOSERDEAM-RXN]]
+
== Reconstruction information  ==
* [[BETA-UREIDOPROPIONASE-RXN]]
+
* Category: [[annotation]]
* [[RXN0-5222]]
+
** Source: [[annotation-esiliculosus_genome]]
* [[GMP-REDUCT-RXN]]
+
*** Tool: [[pathwaytools]]
* [[DCMP-DEAMINASE-RXN]]
+
* [[RXN-6381]]
+
* [[RXNN-404]]
+
* [[AGMATINE-DEIMINASE-RXN]]
+
* [[GLUTAMIN-RXN]]
+
* [[ADENODEAMIN-RXN]]
+
* [[AMP-DEAMINASE-RXN]]
+
* [[PYRAZIN-RXN]]
+
* [[PROTEIN-ARGININE-DEIMINASE-RXN]]
+
* [[RXN-11784]]
+
* [[R311-RXN]]
+
* [[LCYSDESULF-RXN]]
+
* [[AMACETOXID-RXN]]
+
* [[CYSTHIOCYS-RXN]]
+
* [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
+
* [[RXN-11210]]
+
* [[RXN-9615]]
+
* [[PMPOXI-RXN]]
+
* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
+
* [[CYTIDEAM2-RXN]]
+
* [[RIBOFLAVINSYNDEAM-RXN]]
+
* [[AMINEOXID-RXN]]
+
* [[RXN-646]]
+
* [[CYSTATHIONINE-BETA-LYASE-RXN]]
+
* [[4.1.99.4-RXN]]
+
* [[ORNITHINE-CYCLODEAMINASE-RXN]]
+
* [[ASPARAGHYD-RXN]]
+
* [[THREDEHYD-RXN]]
+
* [[RXN-1404]]
+
* [[RXN6666-4]]
+
* [[RXN-9597]]
+
* [[METBALT-RXN]]
+
* [[AMINEPHEN-RXN]]
+
* [[RXN-5821]]
+
* [[RXN-15127]]
+
* [[RXN-15130]]
+
* [[HISTIDINE-AMMONIA-LYASE-RXN]]
+
* [[RXN-15123]]
+
* [[RXN-8899]]
+
* [[RXN-12729]]
+
* [[OHMETHYLBILANESYN-RXN]]
+
* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
+
* [[ADDALT-RXN]]
+
== Reaction(s) of unknown directionality ==
+
* [[RXN-14727]]
+
* [[ALANINE-DEHYDROGENASE-RXN]]
+
* [[GCVMULTI-RXN]]
+
* [[GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.]]
+
* [[RXN-17608]]
+
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
+
* [[L-AMINO-ACID-DEHYDROGENASE-RXN-TYR/NAD/WATER//P-HYDROXY-PHENYLPYRUVATE/AMMONIUM/NADH/PROTON.61.]]
+
* [[RXN-12878]]
+
* [[RXN-14728]]
+
* [[AMIDASE-RXN]]
+
* [[GCVT-RXN]]
+
* [[GLUTDEHYD-RXN]]
+
* [[RXN-11811]]
+
* [[CARBAMATE-KINASE-RXN]]
+
 
== External links  ==
 
== External links  ==
* CAS : 14798-03-9
+
{{#set: direction=REVERSIBLE}}
* BIGG : 33515
+
{{#set: in pathway=PWY-6507}}
* PUBCHEM:
+
{{#set: reconstruction category=annotation}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=223 223]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
* HMDB : HMDB41827
+
{{#set: reconstruction tool=pathwaytools}}
* LIGAND-CPD:
+
** [http://www.genome.jp/dbget-bin/www_bget?C01342 C01342]
+
* CHEMSPIDER:
+
** [http://www.chemspider.com/Chemical-Structure.218.html 218]
+
* CHEBI:
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28938 28938]
+
* METABOLIGHTS : MTBLC28938
+
{{#set: smiles=[NH4+]}}
+
{{#set: inchi key=InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O}}
+
{{#set: common name=ammonium}}
+
{{#set: molecular weight=18.038    }}
+
{{#set: common name=NH4+}}
+
{{#set: consumed by=GLUTAMINESYN-RXN|ASNSYNA-RXN|RXN-13202|GMP-SYN-NH3-RXN|RXN-9615|RXN-16910|RXN-14325|NAD-SYNTH-NH3-RXN}}
+
{{#set: produced by=HOMOSERDEAM-RXN|BETA-UREIDOPROPIONASE-RXN|RXN0-5222|GMP-REDUCT-RXN|DCMP-DEAMINASE-RXN|RXN-6381|RXNN-404|AGMATINE-DEIMINASE-RXN|GLUTAMIN-RXN|ADENODEAMIN-RXN|AMP-DEAMINASE-RXN|PYRAZIN-RXN|PROTEIN-ARGININE-DEIMINASE-RXN|RXN-11784|R311-RXN|LCYSDESULF-RXN|AMACETOXID-RXN|CYSTHIOCYS-RXN|N-CARBAMOYLPUTRESCINE-AMIDASE-RXN|RXN-11210|RXN-9615|PMPOXI-RXN|FERREDOXIN--NITRITE-REDUCTASE-RXN|CYTIDEAM2-RXN|RIBOFLAVINSYNDEAM-RXN|AMINEOXID-RXN|RXN-646|CYSTATHIONINE-BETA-LYASE-RXN|4.1.99.4-RXN|ORNITHINE-CYCLODEAMINASE-RXN|ASPARAGHYD-RXN|THREDEHYD-RXN|RXN-1404|RXN6666-4|RXN-9597|METBALT-RXN|AMINEPHEN-RXN|RXN-5821|RXN-15127|RXN-15130|HISTIDINE-AMMONIA-LYASE-RXN|RXN-15123|RXN-8899|RXN-12729|OHMETHYLBILANESYN-RXN|GUANIDINOBUTANAMIDE-NH3-RXN|ADDALT-RXN}}
+
{{#set: reversible reaction associated=RXN-14727|ALANINE-DEHYDROGENASE-RXN|GCVMULTI-RXN|GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.|RXN-17608|GLUTAMATE-DEHYDROGENASE-RXN|L-AMINO-ACID-DEHYDROGENASE-RXN-TYR/NAD/WATER//P-HYDROXY-PHENYLPYRUVATE/AMMONIUM/NADH/PROTON.61.|RXN-12878|RXN-14728|AMIDASE-RXN|GCVT-RXN|GLUTDEHYD-RXN|RXN-11811|CARBAMATE-KINASE-RXN}}
+

Revision as of 13:25, 21 March 2018

Reaction RXN-16475

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-deoxy-L-threo-hex-4-enopyranuronate[c] <=> 1 5-dehydro-4-deoxy-D-glucuronate[c]

Genes associated with this reaction

Pathways

  • PWY-6507, 4-deoxy-L-threo-hex-4-enopyranuronate degradation: PWY-6507
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links