Difference between revisions of "Ec-20 000990"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-275...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiolase-like, subgroup *...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1803 RXN3O-1803] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
+
 
* common name:
 
* common name:
−
** L-arginine degradation X (arginine monooxygenase pathway)
+
** Thiolase-like, subgroup
 +
** Beta-ketoacyl synthase, N-terminal
 +
** beta-ketoacyl synthase, partial
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[ARGININE-2-MONOOXYGENASE-RXN]]
+
** 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[3-oxo-stearoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
−
** 0 associated gene:
+
* With common name(s):
−
** 1 reconstruction source(s) associated:
+
** 1 a palmitoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-stearoyl-[acp][c] '''+''' 1 CO2[c]
−
*** [[annotation-esiliculosus_genome]]
+
 
−
* [[GUANIDINOBUTANAMIDE-NH3-RXN]]
+
== Genes associated with this reaction  ==
−
** 2 associated gene(s):
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[Ec-06_009020]]
+
* Gene: [[Ec-27_003480]]
−
*** [[Ec-02_005910]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 reconstruction source(s) associated:
+
*** Assignment: EC-NUMBER
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
* [[GUANIDINOBUTYRASE-RXN]]
+
* Gene: [[Ec-27_002090]]
−
** 0 associated gene:
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 reconstruction source(s) associated:
+
*** Assignment: EC-NUMBER
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
== Reaction(s) not found ==
+
* Gene: [[Ec-12_000650]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-12_000640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
== Pathways  ==
 +
* [[PWY3O-355]], stearate biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: taxonomic range=TAX-201174}}
+
{{#set: common name=Thiolase-like, subgroup}}
−
{{#set: common name=L-arginine degradation X (arginine monooxygenase pathway)}}
+
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
−
{{#set: reaction found=3}}
+
{{#set: common name=beta-ketoacyl synthase, partial}}
−
{{#set: total reaction=3}}
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
{{#set: completion rate=100.0}}
+
{{#set: ec number=EC-2.3.1.86}}
 +
{{#set: ec number=EC-2.3.1.41}}
 +
{{#set: gene associated=Ec-27_003480|Ec-27_002090|Ec-12_000650|Ec-12_000640}}
 +
{{#set: in pathway=PWY3O-355}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:28, 21 March 2018

Reaction RXN3O-1803

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Thiolase-like, subgroup
    • Beta-ketoacyl synthase, N-terminal
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY3O-355, stearate biosynthesis III (fungi): PWY3O-355
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_000990&oldid=18844"